{"id":"W6964460624","doi":"10.25646/6016","title":"Characterization of a hepatitis C virus genotype 1 divergent isolate from an HIV-1 coinfected individual in Germany assigned to a new subtype 1o","year":2019,"lang":"en","type":"other","venue":"Robert-Koch-Institut (RKI)","topic":"","field":"","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"NS5B; Genotype; Phylogenetic tree; Genome; Genotyping; Hypervariable region; Whole genome sequencing; Hepatitis C virus; NS3","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["metaepi_narrow","insufficient_payload"],"category_scores_codex":[0.0003700826,0.00148604,0.002147199,0.002276855,0.0001162281,0.0001976469,0.001403393,0.001405549,0.00754592],"category_scores_gemma":[0.0002051678,0.001642975,0.0003091403,0.001816944,0.0001647322,0.0006589027,0.0006583027,0.000754858,0.02103563],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007266025,"about_ca_system_score_gemma":0.001457887,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.08446262,"about_ca_topic_score_gemma":0.1164167,"domain_scores_codex":[0.9934121,0.0005248637,0.001549913,0.001908577,0.001384352,0.001220176],"domain_scores_gemma":[0.9951727,0.00007946663,0.001673905,0.002037751,0.0002385062,0.0007976708],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001467227,0.001898912,0.04622651,0.0003815501,0.001607405,0.000321394,0.005299716,0.0005489893,0.8252433,0.0005655841,0.1118625,0.00457688],"study_design_scores_gemma":[0.005404653,0.0007153502,0.3780279,0.002199361,0.0008358895,0.0000152031,0.00001250825,0.0007362935,0.005503095,0.00005058785,0.6033478,0.003151407],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"other","genre_scores_codex":[0.8525786,0.0012269,0.009441864,0.0002241884,0.00663003,0.01065498,0.03841479,0.002399131,0.07842949],"genre_scores_gemma":[0.4231662,0.002797964,0.009987083,0.002415099,0.006091339,0.0007844975,0.0841466,0.01075811,0.4598531],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.8197402,"threshold_uncertainty_score":0.9998909,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01432220133928284,"score_gpt":0.2461744469213877,"score_spread":0.2318522455821049,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}