{"id":"W6964949914","doi":"10.3389/fmicb.2021.637813.s001","title":"Image_1_The Emergence of Invasive Streptococcus pneumoniae Serotype 24F in Lebanon: Complete Genome Sequencing Reveals High Virulence and Antimicrobial Resistance Characteristics.png","year":2021,"lang":"en","type":"other","venue":"Figshare","topic":"Ecology and biodiversity studies","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Multilocus sequence typing; Serotype; Streptococcus pneumoniae; Virulence; Typing; Whole genome sequencing; Antibiotic resistance; Genome","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001290403,0.000372882,0.000239664,0.001396709,0.0003548466,0.000650345,0.0003574479,0.0007498708,0.05939284],"category_scores_gemma":[0.0003064563,0.0001864516,0.0003287513,0.00105902,0.0001512312,0.0002936658,0.0004349781,0.0004627769,0.00981997],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003947357,"about_ca_system_score_gemma":0.0003667705,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01167202,"about_ca_topic_score_gemma":0.01303325,"domain_scores_codex":[0.999943,0.000004953341,0.000002225376,0.00001516695,0.00001662006,0.0000180791],"domain_scores_gemma":[0.9998591,0.00003180005,0.00002269245,0.000007772949,0.00005026561,0.00002833595],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0007866563,0.0001248474,0.02211877,0.001275157,0.00006799713,0.003387359,0.0006340397,0.001138442,0.08303663,0.001086911,0.8015056,0.08483766],"study_design_scores_gemma":[0.0002111654,0.0002455144,0.2747116,0.0005791526,0.00008027394,0.005094711,0.001311964,0.008472528,0.0172186,0.001590392,0.6904109,0.00007322763],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"dataset","genre_gemma":"other","genre_scores_codex":[0.1827134,0.00422701,0.008258965,0.009978198,0.002945513,0.0003253599,0.6722085,0.01575433,0.1035887],"genre_scores_gemma":[0.3051685,0.003469816,0.02663862,0.002201228,0.001184251,0.0002105485,0.6039315,0.002795577,0.05440005],"genre_candidate":"other","genre_consensus":null,"teacher_disagreement_score":0.9406072,"threshold_uncertainty_score":0.1986889,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02832168550435803,"score_gpt":0.2157554392890498,"score_spread":0.1874337537846917,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}