{"id":"W6965584262","doi":"10.3389/fmicb.2020.01322.s001","title":"Table_1_An Unusual Salmonella Enteritidis Strain Carrying a Modified Virulence Plasmid Lacking the prot6e Gene Represents a Geographically Widely Distributed Lineage.xlsx","year":2020,"lang":"en","type":"dataset","venue":"Figshare","topic":"Plant Ecology and Soil Science","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Virulence; Plasmid; Salmonella enteritidis; Multilocus sequence typing; Salmonella enterica; Phage typing; Whole genome sequencing; Gene; Salmonella","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001172041,0.0008135422,0.0006191207,0.001504478,0.0006885871,0.0006392925,0.0005963021,0.0004821309,0.2227803],"category_scores_gemma":[0.0006276778,0.0002559554,0.0002278768,0.002639944,0.0002284213,0.0005061501,0.0003579666,0.0006847885,0.03156099],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003154471,"about_ca_system_score_gemma":0.0004265395,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002321235,"about_ca_topic_score_gemma":0.003845617,"domain_scores_codex":[0.9998565,0.00001598006,0.0000130945,0.00004040594,0.00005006808,0.00002391145],"domain_scores_gemma":[0.9996313,0.000121925,0.00007896542,0.00004542809,0.00006851408,0.00005378266],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.002431803,0.0006074032,0.01544426,0.004573693,0.0001377575,0.001348868,0.0003411964,0.0006488374,0.2598284,0.003699291,0.6087888,0.1021497],"study_design_scores_gemma":[0.0002635298,0.0005548361,0.09789058,0.0002955795,0.0000548978,0.001643546,0.0003520971,0.000730091,0.03092362,0.001209943,0.8660069,0.00007430471],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"dataset","genre_gemma":"dataset","genre_scores_codex":[0.02967203,0.0004008615,0.003029963,0.0004356771,0.0006281431,0.0002488735,0.9380605,0.004386482,0.02313756],"genre_scores_gemma":[0.0519375,0.0005443933,0.01465735,0.0003982678,0.00007414961,0.0001756698,0.8944477,0.001274954,0.03649],"genre_candidate":"dataset","genre_consensus":"dataset","teacher_disagreement_score":0.2227803,"threshold_uncertainty_score":0.7452743,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03228621531435948,"score_gpt":0.2452612948985133,"score_spread":0.2129750795841538,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}