{"id":"W6968505468","doi":"10.5281/zenodo.3666670","title":"CanDIG v2.0: the ClinDIG Project, the Canadian Distributed Infrastructure for Genomics","year":2020,"lang":"en","type":"article","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Genomics and Rare Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; Hospital for Sick Children","funders":"","keywords":"Software; Genomics; Software development; Work (physics); Key (lock)","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":["open_science"],"consensus_categories":[],"category_scores_codex":[0.002779792,0.002626686,0.001196715,0.00347527,0.001828432,0.004056673,0.005426985,0.001536928,0.0509675],"category_scores_gemma":[0.006407159,0.001602492,0.001377216,0.004040825,0.00101317,0.001918176,0.003411018,0.003056683,0.04160376],"about_ca_system_candidate":true,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.004399751,"about_ca_system_score_gemma":0.01408395,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.2989925,"about_ca_topic_score_gemma":0.2223773,"domain_scores_codex":[0.9984425,0.0001776643,0.00007912533,0.0003118444,0.0007287576,0.000260088],"domain_scores_gemma":[0.9979889,0.0003559144,0.0001020851,0.0003444155,0.000691996,0.000516658],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0007387953,0.00008290817,0.002460639,0.0008651312,0.0001640544,0.0001861423,0.0003433822,0.003347259,0.00745627,0.009644912,0.8814209,0.09328965],"study_design_scores_gemma":[0.0005779813,0.00006920661,0.003837364,0.0002709502,0.0001105018,0.0003226192,0.0001522485,0.02249583,0.008917807,0.01214634,0.9508192,0.00027997],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"software","genre_gemma":"methods","genre_scores_codex":[0.005716244,0.002211514,0.1469298,0.001520177,0.0004778702,0.000968514,0.1536919,0.6545637,0.03392029],"genre_scores_gemma":[0.04492141,0.002112805,0.2280555,0.001674506,0.0001640961,0.001625056,0.4964353,0.1852659,0.03974556],"genre_candidate":"methods","genre_consensus":null,"teacher_disagreement_score":0.9956002,"threshold_uncertainty_score":0.5945043,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02398649543741586,"score_gpt":0.2336133375702577,"score_spread":0.2096268421328419,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}