{"id":"W6969057895","doi":"10.5281/zenodo.8015292","title":"bhattlab/kraken2_classification: Full containerization","year":2023,"lang":"en","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"","field":"","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"Glycemic Index Laboratories","funders":"","keywords":"Pipeline (software); Containerization; Code (set theory); Set (abstract data type); License; Test (biology); Container (type theory)","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002357607,0.005142379,0.002443429,0.003782675,0.001736195,0.005050065,0.0049901,0.001669633,0.14014],"category_scores_gemma":[0.008621292,0.002450648,0.003135013,0.003857965,0.0009057158,0.005867635,0.004528483,0.004252499,0.3214878],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.002043066,"about_ca_system_score_gemma":0.002282146,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01392678,"about_ca_topic_score_gemma":0.0170468,"domain_scores_codex":[0.9970506,0.0002931968,0.0002035737,0.001224558,0.0008006145,0.0004273435],"domain_scores_gemma":[0.9964593,0.0004649213,0.0001478219,0.001798903,0.0008715894,0.0002575672],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001426349,0.00002512369,0.0004709644,0.0002114725,0.00003944299,0.00002189665,0.00005431626,0.0003081044,0.001100882,0.0007605218,0.9825122,0.01435235],"study_design_scores_gemma":[0.0002305997,0.00006879359,0.003655252,0.0001621271,0.00006486276,0.0001752977,0.0001625188,0.01195046,0.01975672,0.009290387,0.9542898,0.0001932036],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"software","genre_gemma":"software","genre_scores_codex":[0.001622309,0.0003152234,0.02947799,0.0003735064,0.0005615043,0.0001661019,0.2624856,0.6914158,0.01358195],"genre_scores_gemma":[0.008730096,0.0002149927,0.04338626,0.0004936212,0.0001174394,0.0005394833,0.7509601,0.1818589,0.01369917],"genre_candidate":"software","genre_consensus":"software","teacher_disagreement_score":0.14014,"threshold_uncertainty_score":0.468815,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04952828415111325,"score_gpt":0.2609117508587743,"score_spread":0.2113834667076611,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}