{"id":"W6976325247","doi":"10.60692/85a7e-mk828","title":"Deep resequencing identifies candidate functional genes in leprosy GWAS loci","year":2021,"lang":"en","type":"article","venue":"Greater South Information System","topic":"Leprosy Research and Treatment","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; McGill University Health Centre","funders":"","keywords":"Genome-wide association study; Leprosy; Candidate gene; Genetic association; Locus (genetics); Nonsynonymous substitution; Haplotype; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002997922,0.0001358057,0.0002366517,0.0002692419,0.0001137596,0.0001545804,0.0000491918,0.00008069084,0.000129685],"category_scores_gemma":[0.0000509273,0.0001063569,0.0000744781,0.0003317677,0.0000281329,0.0005079109,0.00005903531,0.0001262229,0.0009462347],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004342527,"about_ca_system_score_gemma":0.0002518716,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00008238754,"about_ca_topic_score_gemma":0.0000176806,"domain_scores_codex":[0.9984912,0.00005840556,0.0004757238,0.0001762168,0.0004958247,0.0003025964],"domain_scores_gemma":[0.9990982,0.000007734438,0.00009548875,0.000331342,0.0003295907,0.0001376917],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002726855,0.00001021722,0.9753472,0.0009564021,0.0001431393,0.0004115002,0.02118425,0.0003173188,0.0001355457,0.0001317064,0.0001727777,0.0009173071],"study_design_scores_gemma":[0.008165146,0.0001606585,0.8943348,0.0007135742,0.00009617567,0.001423752,0.04256805,0.006431509,0.04491325,0.00001113819,0.0008046963,0.0003772726],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9918206,0.00008145226,0.002909764,0.0002092575,0.0002137559,0.0004069109,0.00003070384,0.0000927146,0.00423484],"genre_scores_gemma":[0.9981782,0.000001613392,0.0001470076,0.0001020142,0.0000946022,0.0001160008,0.0002075402,0.000008636931,0.001144384],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.08101238,"threshold_uncertainty_score":0.9998316,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05112063124059835,"score_gpt":0.2591562354551708,"score_spread":0.2080356042145725,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}