{"id":"W6976722847","doi":"10.60692/vzdze-mf306","title":"Genome-wide association studies and genomic prediction of breeding values for calving performance and body conformation traits in Holstein cattle","year":2017,"lang":"en","type":"article","venue":"Greater South Information System","topic":"Genetic and phenotypic traits in livestock","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta; University of Guelph","funders":"","keywords":"Single-nucleotide polymorphism; Ice calving; Genome-wide association study; SNP; Holstein Cattle; Genetic association; Dairy cattle; Genotype; Breed","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003089768,0.0003449458,0.0004490735,0.000806884,0.0003305685,0.0007660989,0.0004070833,0.0004543361,0.0009673712],"category_scores_gemma":[0.003082332,0.0001646866,0.0005931524,0.001060874,0.0003406277,0.0002368666,0.0003845847,0.0004709108,0.000103926],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002068352,"about_ca_system_score_gemma":0.000282812,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003668467,"about_ca_topic_score_gemma":0.005597588,"domain_scores_codex":[0.9987074,0.000605886,0.00007882934,0.000358124,0.0001343377,0.0001155065],"domain_scores_gemma":[0.9978929,0.001329162,0.0003878686,0.0001687363,0.0001137836,0.0001074978],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0008453642,0.00007001615,0.9706858,0.00007385841,0.001275832,0.0003445064,0.0001709408,0.001575691,0.0125945,0.0002165067,0.0001324171,0.01201456],"study_design_scores_gemma":[0.00002804446,0.0001002813,0.9951799,0.000009634355,0.0004287321,0.0001478223,0.00006253499,0.003073878,0.0005254587,0.0002005005,0.0002375011,0.000005819812],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9969082,0.0007700237,0.001866248,0.00005545111,0.000005463472,0.000003422927,0.0001863553,0.00001505011,0.0001896391],"genre_scores_gemma":[0.997908,0.0001949357,0.001388114,0.00004012996,0.00001393244,0.000005696194,0.000323982,0.000005212795,0.0001200751],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003668467,"threshold_uncertainty_score":0.01634049,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02789069716459195,"score_gpt":0.2298975707177179,"score_spread":0.2020068735531259,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}