{"id":"W6976794998","doi":"10.60692/7bf1v-d3510","title":"Genomic Variation across a Clinical Cryptococcus Population Linked to Disease Outcome","year":2022,"lang":"en","type":"article","venue":"Greater South Information System","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Health Sciences Centre; Sunnybrook Health Science Centre","funders":"","keywords":"Cryptococcus neoformans; Genome-wide association study; Disease; Cryptococcosis; Genetic variation; Cryptococcus; Gene; Virulence; Population","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002553707,0.0002465378,0.0001893966,0.0004366716,0.000331619,0.0004600736,0.0001762027,0.000340252,0.001350926],"category_scores_gemma":[0.0009846358,0.0001266944,0.000193043,0.0007034094,0.0004438427,0.0001140381,0.0003590144,0.0004277266,0.0000873411],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002985536,"about_ca_system_score_gemma":0.0002139957,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0100181,"about_ca_topic_score_gemma":0.01179458,"domain_scores_codex":[0.9996896,0.00006180772,0.00002140157,0.0001313261,0.00004654906,0.00004921504],"domain_scores_gemma":[0.9995387,0.0001411464,0.0001726261,0.00004954746,0.00004428384,0.00005365171],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0005218553,0.00004419977,0.9516417,0.0000400348,0.0003147825,0.000763407,0.0004770205,0.0003908385,0.04002626,0.0002293755,0.0002030486,0.005347397],"study_design_scores_gemma":[0.000007345185,0.00005865602,0.9978309,0.00000837157,0.00004184005,0.0005062714,0.0001305738,0.0002553911,0.0007857736,0.00006320498,0.0003074778,0.000004207182],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9992003,0.0001108702,0.0002039591,0.00003839119,0.000001608677,0.000003832221,0.0003130173,0.000003159613,0.0001248161],"genre_scores_gemma":[0.9993739,0.00006648901,0.0001655664,0.00002890434,0.000001831133,0.000003215295,0.0002522338,0.00000243864,0.0001055794],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0100181,"threshold_uncertainty_score":0.01991957,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.08414189187570419,"score_gpt":0.33143519532562,"score_spread":0.2472933034499158,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}