{"id":"W6976897424","doi":"10.6084/m9.figshare.23537653.v1","title":"Additional file 1 of Expanding the application of haplotype-based genomic predictions to the wild: A case of antibody response against Teladorsagia circumcincta in Soay sheep","year":2023,"lang":"en","type":"article","venue":"Figshare","topic":"Helminth infection and control","field":"Veterinary","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"London Health Sciences Centre; Dalhousie University","funders":"","keywords":"Teladorsagia circumcincta; Antibody response; Antibody; Selection (genetic algorithm); Immune system","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0001782582,0.00009114553,0.0001436107,0.0002146405,0.0001051049,0.000008815163,0.0001741924,0.00006437958,0.5482897],"category_scores_gemma":[0.002229703,0.00006790974,0.00009305248,0.000637415,0.00002023982,0.00004611847,0.00006658953,0.0001227635,0.0007901522],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004842947,"about_ca_system_score_gemma":0.0001489773,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004444047,"about_ca_topic_score_gemma":0.00008316684,"domain_scores_codex":[0.9990479,0.0001841231,0.0003302557,0.0001624087,0.0001387304,0.0001365928],"domain_scores_gemma":[0.9970126,0.002292927,0.0001826597,0.0003638167,0.0001100505,0.00003799148],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0003854403,0.0000737747,0.00004870729,0.00007821675,0.0000283475,0.0000470797,0.0004159958,0.001320142,0.009416676,0.000005269087,0.9848844,0.003295903],"study_design_scores_gemma":[0.001037841,0.0005823211,0.1709391,0.002248322,0.0000277562,0.00018105,0.001197189,0.07204674,0.0007324617,0.00001818874,0.7507174,0.0002716165],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"dataset","genre_gemma":"empirical","genre_scores_codex":[0.04551692,0.000007398928,0.00003607212,0.000186633,0.00002066532,0.000553204,0.9532383,0.00004996259,0.0003908072],"genre_scores_gemma":[0.8155587,2.407669e-7,0.00001735278,0.000110183,0.00004473541,0.001438428,0.1827487,0.00001478113,0.00006694489],"genre_candidate":"dataset","genre_consensus":null,"teacher_disagreement_score":0.7704896,"threshold_uncertainty_score":0.9999878,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04263115424441026,"score_gpt":0.3232235829254356,"score_spread":0.2805924286810253,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}