{"id":"W6977000334","doi":"10.6084/m9.figshare.27978276.v1","title":"Additional file 5 of Analysis of early childhood intestinal microbial dynamics in a continuous-flow bioreactor","year":2024,"lang":"en","type":"article","venue":"Figshare","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto; University of Guelph; SickKids Foundation; Hospital for Sick Children","funders":"","keywords":"16S ribosomal RNA; Phylogenetic tree; Axenic; Accession number (library science); Ribosomal RNA; Metagenomics; Gene; Bacteria","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.002297895,0.002100117,0.002212013,0.002660084,0.00129769,0.002811967,0.002594357,0.001895507,0.7991374],"category_scores_gemma":[0.01458964,0.0009711416,0.00143405,0.003594641,0.0003894609,0.001883066,0.001376967,0.001185348,0.2056832],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001148641,"about_ca_system_score_gemma":0.002209337,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005653488,"about_ca_topic_score_gemma":0.0101081,"domain_scores_codex":[0.99878,0.000158799,0.0001655537,0.0003440357,0.0003714266,0.0001802305],"domain_scores_gemma":[0.989753,0.007268148,0.0004879229,0.0007971541,0.001367726,0.0003261103],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0007335256,0.0002375908,0.003711059,0.007655534,0.0001608181,0.0001934066,0.0001149641,0.001575869,0.001862723,0.001058464,0.9699032,0.01279289],"study_design_scores_gemma":[0.003593853,0.0005336668,0.0298873,0.002963158,0.0003042041,0.0004610333,0.0003600139,0.006503327,0.005647511,0.009133419,0.9403346,0.0002778389],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"dataset","genre_gemma":"empirical","genre_scores_codex":[0.0002498053,0.00002183324,0.000564058,0.00003433861,0.00003491062,0.00005777725,0.9974318,0.00107161,0.0005338455],"genre_scores_gemma":[0.004471655,0.00009282355,0.006834055,0.0002327783,0.00005182511,0.001051413,0.9820181,0.00162192,0.003625338],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.7991374,"threshold_uncertainty_score":0.2865061,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007668603932954728,"score_gpt":0.2289771136012008,"score_spread":0.221308509668246,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}