{"id":"W6977038305","doi":"10.6084/m9.figshare.12552851","title":"Additional file 1 of DNA methylation signatures of Prostate Cancer in peripheral T-cells","year":2020,"lang":"en","type":"article","venue":"Figshare","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University Health Centre; University of Calgary; McGill University","funders":"","keywords":"DNA methylation; Methylation; CpG site; Pyrosequencing; Illumina Methylation Assay; Differentially methylated regions; DNA","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001435847,0.001739417,0.001669466,0.001989562,0.001314713,0.002236471,0.002450663,0.001636523,0.8737584],"category_scores_gemma":[0.01911451,0.0008292458,0.001144272,0.003388558,0.0003207362,0.001801181,0.00123126,0.001388463,0.1762154],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001014792,"about_ca_system_score_gemma":0.002154245,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.006714267,"about_ca_topic_score_gemma":0.01203309,"domain_scores_codex":[0.9991052,0.0001131535,0.0001354,0.0002839567,0.0002085191,0.0001537977],"domain_scores_gemma":[0.9896811,0.007229986,0.0006381167,0.0008304454,0.001206176,0.000414103],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"observational","study_design_scores_codex":[0.0008317381,0.0001576754,0.004292838,0.005250015,0.00009696864,0.0002371344,0.0000974351,0.0006165757,0.0009637929,0.0007195883,0.9740354,0.01270077],"study_design_scores_gemma":[0.009708414,0.0008203665,0.05113967,0.004507413,0.0004520469,0.001846429,0.0005071504,0.004122482,0.00446154,0.01233149,0.9097999,0.0003031454],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"dataset","genre_gemma":"empirical","genre_scores_codex":[0.0002145793,0.00002497179,0.0003272249,0.00006271158,0.00003693468,0.00006480996,0.9985909,0.0002703842,0.0004075513],"genre_scores_gemma":[0.005734878,0.0001522022,0.003839671,0.0006063821,0.000112293,0.001733098,0.9811053,0.0009683538,0.005747764],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.8737584,"threshold_uncertainty_score":0.1800682,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01649846334634714,"score_gpt":0.2503754538241677,"score_spread":0.2338769904778206,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}