{"id":"W6977053804","doi":"10.6084/m9.figshare.21510553.v1","title":"Additional file 8 of Methylome and transcriptome data integration reveals potential roles of DNA methylation and candidate biomarkers of cow Streptococcus uberis subclinical mastitis","year":2022,"lang":"en","type":"dataset","venue":"Figshare","topic":"Atmospheric Ozone and Climate","field":"Earth and Planetary Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal; Université Laval; McGill University; Agriculture and Agri-Food Canada","funders":"","keywords":"DNA methylation; Transcriptome; Context (archaeology); Streptococcus uberis; Methylation; DNA; Reprogramming; Bisulfite sequencing","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001057263,0.001674296,0.001653479,0.001998738,0.0009296038,0.001880773,0.002180684,0.001842358,0.4338312],"category_scores_gemma":[0.008253133,0.0006022132,0.001675954,0.003002079,0.000325241,0.001212603,0.00140064,0.001372859,0.08055416],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001015846,"about_ca_system_score_gemma":0.001618923,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01198808,"about_ca_topic_score_gemma":0.02314393,"domain_scores_codex":[0.9993587,0.00007781839,0.00007848095,0.0002590132,0.0001089091,0.0001170409],"domain_scores_gemma":[0.9967044,0.00201769,0.0002597574,0.0003208937,0.0004986493,0.0001986388],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"observational","study_design_scores_codex":[0.0004535298,0.00008379087,0.006793892,0.004692243,0.000206137,0.0001036817,0.00007524594,0.0008760059,0.0007988388,0.0004944361,0.9807495,0.004672564],"study_design_scores_gemma":[0.004048494,0.0002405244,0.05043831,0.00245944,0.0005422823,0.0004368637,0.000337944,0.002233113,0.002232512,0.005327553,0.9315383,0.0001646715],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"dataset","genre_gemma":"dataset","genre_scores_codex":[0.00009015447,0.00001606508,0.0000368145,0.00001785277,0.000007038075,0.00000794788,0.9996481,0.00007860009,0.00009740152],"genre_scores_gemma":[0.001432095,0.00004561978,0.0005357113,0.0001041637,0.00001273246,0.0002047897,0.9967919,0.0001162618,0.0007567587],"genre_candidate":"dataset","genre_consensus":"dataset","teacher_disagreement_score":0.4338312,"threshold_uncertainty_score":0.8075712,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0294843541814938,"score_gpt":0.2568619122190899,"score_spread":0.2273775580375961,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}