{"id":"W6977200417","doi":"10.6073/pasta/029b089ae5fbad09515c19e2e8bc3331","title":"A droplet digital polymerase chain reaction assay to detect rare helminth parasites infecting natural host populations (Vancouver Island 2023, University of Wisconsin Madison Laboratory colony 2024)","year":2025,"lang":"en","type":"dataset","venue":"Environmental Data Initiative","topic":"","field":"","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Digital polymerase chain reaction; Polymerase chain reaction; Parasite hosting; Parasitology; Wildlife; Helminths; Host (biology); 18S ribosomal RNA","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004049953,0.0007904706,0.0008356699,0.0007160564,0.0004791997,0.00009177473,0.0009711657,0.0004051325,0.0008918356],"category_scores_gemma":[0.0008724143,0.0009556932,0.0001367696,0.0008917476,0.0004586792,0.002068241,0.002031029,0.001150996,0.000585026],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001370401,"about_ca_system_score_gemma":0.0002857227,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002445726,"about_ca_topic_score_gemma":0.04434998,"domain_scores_codex":[0.9960799,0.000663828,0.0006108998,0.001375896,0.0007040541,0.000565393],"domain_scores_gemma":[0.9965132,0.0006048676,0.0008361156,0.001772865,0.00003865602,0.0002342437],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0003828118,0.0003286591,0.001832461,0.000073485,0.000404615,0.0001906092,0.0002162289,0.00001992226,0.002452199,5.746086e-7,0.9937812,0.0003172297],"study_design_scores_gemma":[0.002141611,0.0004358992,0.01820685,0.0008043039,0.0009517211,0.00001958623,0.005163865,0.0001759274,0.001046617,0.000009061655,0.9693293,0.001715247],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"dataset","genre_gemma":"dataset","genre_scores_codex":[0.01362145,0.0004675662,0.00007524228,0.00003308676,0.0009456067,0.001198843,0.9834055,0.00005592884,0.0001968158],"genre_scores_gemma":[0.07377933,0.0001025869,0.0001994002,0.0001290678,0.0001224226,0.00001312976,0.9250694,0.00006011706,0.0005245517],"genre_candidate":"dataset","genre_consensus":"dataset","teacher_disagreement_score":0.06015788,"threshold_uncertainty_score":0.9992893,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01656659955538089,"score_gpt":0.2538055675558609,"score_spread":0.23723896800048,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}