{"id":"W6977297303","doi":"10.6084/m9.figshare.29388061.v1","title":"Additional file 2 of Genomic characterization and virulence of Streptococcus suis serotype 7 sequence type 373 of clonal complex 94","year":2025,"lang":"en","type":"dataset","venue":"Figshare","topic":"Interdisciplinary Research and Collaboration","field":"Decision Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal","funders":"","keywords":"Streptococcus suis; Virulence; Serotype; Genome; Phylogenetics; Whole genome sequencing; Multilocus sequence typing","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000127747,0.0001557977,0.000389876,0.0003229897,0.00006780475,0.00005296865,0.0007440699,0.0001635864,0.9794731],"category_scores_gemma":[0.006106627,0.0001370725,0.00007024899,0.0007472201,0.00006871401,0.0002059517,0.0005342542,0.0001640053,0.0003558652],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003364537,"about_ca_system_score_gemma":0.001014911,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000009037673,"about_ca_topic_score_gemma":0.0000836788,"domain_scores_codex":[0.9977487,0.0001371544,0.0006609361,0.0003702648,0.0009337264,0.0001492182],"domain_scores_gemma":[0.9946366,0.001954214,0.000852044,0.0004868561,0.002008862,0.0000614267],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00008258296,0.00003399125,0.000005613056,0.0002511602,0.00001772369,0.000002976406,0.00001052509,0.000003653856,0.0009930187,0.000002770529,0.9977145,0.000881509],"study_design_scores_gemma":[0.00007429937,0.0002173577,0.01063735,0.001715666,0.00000549024,0.000001626378,0.0000275535,0.0003507201,0.0001730567,0.00006117568,0.9866292,0.0001065119],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"dataset","genre_gemma":"dataset","genre_scores_codex":[0.00006597083,0.00001878423,6.744147e-7,0.00001899714,0.00003672963,0.0003207407,0.9993806,0.000003910707,0.0001536061],"genre_scores_gemma":[0.0001629521,0.000005109578,0.00005691874,0.00001791679,0.00006702375,0.0001738857,0.9984652,0.000003945896,0.001047053],"genre_candidate":"dataset","genre_consensus":"dataset","teacher_disagreement_score":0.9791173,"threshold_uncertainty_score":0.7310644,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1422524560301127,"score_gpt":0.4006501134079594,"score_spread":0.2583976573778466,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}