{"id":"W6977575541","doi":"10.6084/m9.figshare.24425621","title":"Additional file 1 of Genome-wide allele frequency studies in Pacific oyster families identify candidate genes for tolerance to ostreid herpesvirus 1 (OsHV-1)","year":2023,"lang":"en","type":"article","venue":"Figshare","topic":"Animal testing and alternatives","field":"Veterinary","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Vancouver Island University","funders":"","keywords":"Candidate gene; Allele frequency; Oyster; Allele; Gene; Haplotype","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001370417,0.0009064763,0.001133218,0.002479781,0.001135574,0.001232177,0.001873204,0.001001235,0.8457631],"category_scores_gemma":[0.02042115,0.0005583607,0.0007948038,0.003962797,0.0002749612,0.001248741,0.000906955,0.0007786008,0.1291347],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000831247,"about_ca_system_score_gemma":0.001245174,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01202649,"about_ca_topic_score_gemma":0.02051437,"domain_scores_codex":[0.9994185,0.00009803495,0.00009909979,0.0001729474,0.0001157136,0.00009573896],"domain_scores_gemma":[0.9806816,0.01506528,0.001129224,0.001082721,0.001463118,0.0005781357],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"observational","study_design_scores_codex":[0.0003301443,0.0001403007,0.007512842,0.002512814,0.00007857676,0.0001676387,0.0001384228,0.0005351685,0.0003403958,0.0007413452,0.9774151,0.0100872],"study_design_scores_gemma":[0.008071443,0.0006072545,0.143431,0.004256554,0.0004599299,0.001783257,0.000944563,0.003041627,0.001853677,0.01229362,0.8229859,0.000271123],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"dataset","genre_gemma":"other","genre_scores_codex":[0.0003223054,0.0000102063,0.0002227158,0.00004775581,0.00001088563,0.000037811,0.9986168,0.0001866364,0.0005449026],"genre_scores_gemma":[0.01275512,0.0001068967,0.003522545,0.0003382256,0.00006982146,0.001116233,0.9738284,0.0006971611,0.007565556],"genre_candidate":"other","genre_consensus":null,"teacher_disagreement_score":0.8457631,"threshold_uncertainty_score":0.2200001,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.2375060104190747,"score_gpt":0.3996320150669517,"score_spread":0.162126004647877,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}