{"id":"W6986832713","doi":"","title":"Relating the expression-based and sequence-based estimates of regulation in the gap gene system of Drosophila melanogaster","year":2007,"lang":"en","type":"dissertation","venue":"eScholarship@McGill (McGill)","topic":"Developmental Biology and Gene Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Drosophila melanogaster; Gene; Gap gene; Regulation of gene expression; Gene expression; Transcription factor; Set (abstract data type); Gene regulatory network; Gene interaction","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003707407,0.0001892192,0.0001143588,0.0009240492,0.0002844236,0.0004767946,0.0002191786,0.0001836495,0.001689162],"category_scores_gemma":[0.0009630852,0.0001797047,0.000234407,0.0003017929,0.0002905639,0.0002216515,0.0003809251,0.0004618054,0.0005768638],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008020614,"about_ca_system_score_gemma":0.0002139626,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003853811,"about_ca_topic_score_gemma":0.006815993,"domain_scores_codex":[0.9997267,0.00004769867,0.00001892892,0.00008986592,0.0000935194,0.00002326047],"domain_scores_gemma":[0.999666,0.0001866475,0.00004423983,0.0000273085,0.00005750581,0.00001835106],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001538532,0.00002669257,0.01571065,0.0001611566,0.00002889554,0.00003055125,0.0002678444,0.001563912,0.9534208,0.001590972,0.000303473,0.02674113],"study_design_scores_gemma":[0.00002183267,0.0001998937,0.3070157,0.00006665967,0.00008910475,0.0004245228,0.0005126745,0.01510375,0.6592877,0.001275013,0.01596159,0.00004149075],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9551707,0.002754566,0.03128307,0.0001899736,0.00005283547,0.00004120402,0.002242821,0.0001258007,0.008139009],"genre_scores_gemma":[0.9474069,0.002470355,0.03114531,0.0001499202,0.00002280265,0.0001115514,0.005823599,0.000125017,0.01274456],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003853811,"threshold_uncertainty_score":0.007662714,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01793852753929693,"score_gpt":0.2610217172304293,"score_spread":0.2430831896911324,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}