{"id":"W6991067175","doi":"","title":"Examination of the Molecular Epidemiology, Expansion, Population Structure, and Virulence of the Emerging Fungal Pathogen,<italic>Cryptococcus gattii</italic> in the United States","year":2010,"lang":"en","type":"dissertation","venue":"DukeSpace (Duke University)","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Outbreak; Molecular epidemiology; Population; Multilocus sequence typing; Genotype; Population genetics; Organism; Pathogen","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005470542,0.0003194664,0.0005313117,0.0005999709,0.0003404935,0.0000108,0.0003105566,0.0003878558,0.00001529072],"category_scores_gemma":[0.000719204,0.0001992114,0.0001932734,0.001476757,0.0002793458,0.0001161897,0.0001036869,0.0006384182,4.46734e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001072032,"about_ca_system_score_gemma":0.00008581227,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009704531,"about_ca_topic_score_gemma":0.003648762,"domain_scores_codex":[0.9979238,0.0006943316,0.0004083384,0.0003771009,0.0003420991,0.0002543671],"domain_scores_gemma":[0.9978948,0.0003964537,0.0006640676,0.000579328,0.0004158297,0.00004951167],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0005479304,0.0003907613,0.3737055,0.001423201,0.0005549575,0.00007002959,0.02084997,0.002289881,0.506147,0.09014461,0.0005255454,0.003350631],"study_design_scores_gemma":[0.0007301012,0.0001525434,0.9798011,0.0005060813,0.0004397442,0.00001661722,0.008703941,0.0007600526,0.005111763,0.0003214904,0.003218385,0.0002381853],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.996528,0.0005762315,0.00004758485,0.0004765631,0.0004006349,0.0009435579,0.0001380545,0.00001979948,0.0008695364],"genre_scores_gemma":[0.9980479,0.0004292916,0.00008959695,0.00009749668,0.00003345762,0.000005122947,0.0005153358,0.00002383527,0.0007579753],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.6060956,"threshold_uncertainty_score":0.8123605,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01152079748757123,"score_gpt":0.2495396299420831,"score_spread":0.2380188324545119,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}