{"id":"W6991647189","doi":"","title":"Identification of Mycobacterium avium subspecies paratuberculosis strains isolated from dairy goats and dairy sheep in Ontario, Canada","year":2017,"lang":"en","type":"article","venue":"PubMed Central","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Mycobacterium avium subspecies paratuberculosis; Subtyping; Subspecies; Paratuberculosis; Typing; Mycobacterium avium subsp. paratuberculosis; Feces; Population","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000276822,0.0001926575,0.0004025024,0.0000916002,0.0001295819,0.0001436103,0.0002311405,0.000122576,0.0003799785],"category_scores_gemma":[0.0004285936,0.0001838038,0.00006319492,0.00007510294,0.0001519346,0.0003346526,0.0000981485,0.0003205613,0.000002861214],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007962767,"about_ca_system_score_gemma":0.001058718,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9205933,"about_ca_topic_score_gemma":0.9853845,"domain_scores_codex":[0.997628,0.00005532142,0.0004695797,0.0003915005,0.0004144858,0.001041108],"domain_scores_gemma":[0.9983323,0.00006855989,0.0002077491,0.0006419056,0.00008587265,0.0006635861],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002865956,0.0001361278,0.9822463,0.00007255674,0.00009401525,0.0000947771,0.0006696794,0.000001135145,0.01257787,0.00002260394,0.002260903,0.001537401],"study_design_scores_gemma":[0.001326929,0.00004104027,0.9886876,0.0000689494,0.00007257406,0.000007073972,0.0001511161,0.00007576693,0.008441335,0.0000341804,0.0009370323,0.0001563883],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9962545,0.0001819935,0.000005502175,0.001365931,0.0006530408,0.0005805989,0.0002818128,0.00001577054,0.0006608421],"genre_scores_gemma":[0.99864,0.0002425979,0.00002672257,0.00009441375,0.0001989412,0.00009269131,0.0002878823,0.0000177371,0.0003989972],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.06479119,"threshold_uncertainty_score":0.74953,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0202920544121958,"score_gpt":0.2422592834245664,"score_spread":0.2219672290123706,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}