{"id":"W6999759726","doi":"","title":"Diagnosis and mitigation of the systemic impact of genome reduction in <i>Escherichia coli</i> DGF-298","year":2024,"lang":"en","type":"article","venue":"Technical University of Denmark, DTU Orbit (Technical University of Denmark, DTU)","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Genome; Reduction (mathematics); Identification (biology); Human genome; Genomics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009368436,0.0007729355,0.0006212726,0.0005244933,0.0003322183,0.001141927,0.000554988,0.001537538,0.002396037],"category_scores_gemma":[0.001177803,0.0002081104,0.0003982231,0.0004979909,0.0005294891,0.0005419212,0.0008291213,0.0008869637,0.0004821608],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001003263,"about_ca_system_score_gemma":0.001969144,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00471018,"about_ca_topic_score_gemma":0.004771949,"domain_scores_codex":[0.9990957,0.0001684627,0.00003512021,0.0002559304,0.000291497,0.0001534237],"domain_scores_gemma":[0.999319,0.0001379852,0.0002006168,0.00008174455,0.0002002647,0.00006040839],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0006537769,0.0004043789,0.01452493,0.0006369695,0.00005772549,0.0002530686,0.0001219315,0.009205859,0.8796836,0.0027029,0.002362448,0.08939247],"study_design_scores_gemma":[0.00007087935,0.002436636,0.02594898,0.0001959757,0.000203325,0.0003649014,0.0005698649,0.02235732,0.9306358,0.002752093,0.01441848,0.00004564172],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8566706,0.003881271,0.1160785,0.004560497,0.0003375043,0.000436469,0.002631532,0.001491103,0.01391238],"genre_scores_gemma":[0.9659908,0.001393071,0.02766576,0.0006185899,0.00002929317,0.00009034074,0.0008052229,0.00007099913,0.003336083],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00471018,"threshold_uncertainty_score":0.009365499,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006649744639299046,"score_gpt":0.2030563781107814,"score_spread":0.1964066334714823,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}