{"id":"W7003489788","doi":"","title":"Genome Graphs","year":2010,"lang":"en","type":"dissertation","venue":"Library and Archives Canada (Government of Canada)","topic":"Genome Rearrangement Algorithms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Genome; Hybrid genome assembly; Shotgun sequencing; Reference genome; Genomics; Sequence (biology); Sequence assembly; DNA sequencing","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000006774054,0.0002482014,0.0002253469,0.00002378031,0.00009845982,0.00001589626,0.0002702936,0.0001106451,0.00005083777],"category_scores_gemma":[0.000002133057,0.0002578093,0.00004829339,0.00004082898,0.00003760124,0.000008115268,0.00007864505,0.0001894093,2.813911e-9],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000001601978,"about_ca_system_score_gemma":0.001348553,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007093935,"about_ca_topic_score_gemma":0.07471187,"domain_scores_codex":[0.9982742,0.00002479566,0.0002335598,0.0003323987,0.0008771053,0.0002579425],"domain_scores_gemma":[0.9993381,0.00001590522,0.0001804492,0.0002794523,7.892256e-7,0.0001853119],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000236521,0.0000166493,0.001658537,0.0002066896,0.0001466278,0.00001928437,0.00002904174,0.000004402775,0.9917995,0.002025546,0.0003011601,0.003556008],"study_design_scores_gemma":[0.0004205742,0.0001409326,0.1013011,0.00005682836,0.0000638909,0.000006412703,0.001528112,0.00002363378,0.6958097,0.0006620454,0.1993763,0.0006104006],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7150158,0.001500289,0.000007786872,0.0002997388,0.0005841953,0.0002524907,0.0003304181,0.000004945511,0.2820043],"genre_scores_gemma":[0.9043161,0.001007558,0.0007701504,0.0003275538,0.0001776341,0.00002015747,0.00108175,0.00006235667,0.09223671],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2959898,"threshold_uncertainty_score":0.9999874,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.001856347796247532,"score_gpt":0.1445078598836157,"score_spread":0.1426515120873682,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}