{"id":"W7015272162","doi":"","title":"Surveyal and Identification of Stoperators within Cluster A Mycobacteriophages: Points of Insertion and Potential for Subcluster Classification","year":2023,"lang":"en","type":"dissertation","venue":"The Atrium (University of Guelph)","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"","keywords":"Genome; Identification (biology); Sequence (biology); Set (abstract data type); Sequence alignment; Function (biology); Sequence analysis; Cluster (spacecraft)","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004266754,0.0002319262,0.0003101072,0.001347417,0.0004156745,0.000848404,0.0001902264,0.0002885709,0.001725697],"category_scores_gemma":[0.001043768,0.0001115002,0.0005051517,0.001304715,0.0001441045,0.0003072617,0.0005009453,0.0003476054,0.001246824],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002769962,"about_ca_system_score_gemma":0.0004035604,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002195475,"about_ca_topic_score_gemma":0.00354062,"domain_scores_codex":[0.9997519,0.00002167255,0.00002030189,0.0001219491,0.0000488465,0.00003535587],"domain_scores_gemma":[0.9993955,0.0002011224,0.0001243986,0.00005693997,0.0001378772,0.00008423533],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001555846,0.0002044217,0.5036535,0.00108206,0.0002099989,0.0003592754,0.001490042,0.002275283,0.3589857,0.0008763891,0.007331078,0.1219765],"study_design_scores_gemma":[0.0000517142,0.0004781272,0.8772746,0.0001674392,0.0001907558,0.0008721001,0.002005541,0.01263534,0.07804848,0.001183645,0.02701861,0.00007359707],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9809349,0.0006171813,0.003217857,0.00006242542,0.00001356394,0.00003333845,0.01378476,0.0001541381,0.001181894],"genre_scores_gemma":[0.8909043,0.001075863,0.03013304,0.00007650883,0.00001753575,0.0001140103,0.07379565,0.0001050306,0.003778115],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002195475,"threshold_uncertainty_score":0.005773067,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01338765203844785,"score_gpt":0.228868985264022,"score_spread":0.2154813332255741,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}