{"id":"W7017659978","doi":"","title":"Bioinformatic Analyses for Nitrogen Responsive Transcriptome and De Novo Regulatory Motif Discovery in Potato «Solanum tuberosum»","year":2023,"lang":"en","type":"dissertation","venue":"eScholarship@McGill (McGill)","topic":"Potato Plant Research","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"","keywords":"Transcriptome; Gene; Motif (music); Gene expression; Genome","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003388688,0.0002606107,0.0003087958,0.0005418024,0.0002964366,0.0004347573,0.0002380559,0.0001908086,0.001521088],"category_scores_gemma":[0.0004561293,0.0001446266,0.0007295273,0.0005034597,0.0001009471,0.0001885602,0.0002111231,0.0004070571,0.0004414443],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000238316,"about_ca_system_score_gemma":0.0002817492,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005528081,"about_ca_topic_score_gemma":0.002072606,"domain_scores_codex":[0.9998695,0.00002300394,0.00001164041,0.0000530045,0.00003065004,0.0000122329],"domain_scores_gemma":[0.9998024,0.00009622195,0.00003539136,0.00001268219,0.00003018187,0.00002311843],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0007151456,0.0001584841,0.01369755,0.0006125849,0.0001241145,0.0006625821,0.000320693,0.004270406,0.9164678,0.0006829924,0.002226226,0.06006136],"study_design_scores_gemma":[0.0001951094,0.0009029256,0.26774,0.0001731791,0.0005837693,0.003078847,0.00115431,0.2930723,0.393473,0.002847757,0.03660701,0.0001717048],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9501147,0.001085641,0.0375315,0.0003893152,0.0000481642,0.0001048852,0.00747802,0.001688621,0.00155932],"genre_scores_gemma":[0.7864503,0.001134293,0.1734039,0.0002463511,0.0000353011,0.0002223852,0.03537114,0.0004577082,0.002678517],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001521088,"threshold_uncertainty_score":0.005088508,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04287711543759342,"score_gpt":0.2912759967446181,"score_spread":0.2483988813070246,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}