{"id":"W7033080546","doi":"","title":"Promoter Identification in Daphnia Populations Revealed by Transcription Start Site Profiling","year":2020,"lang":"en","type":"dissertation","venue":"Arizona State University Library Digital Repository (Arizona State University)","topic":"Nail Diseases and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Daphnia; Promoter; Transcription (linguistics); Transcription factor; DNA binding site; Response element; Genome; Model organism","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00003706088,0.000699776,0.0007685808,0.001168756,0.0004319776,0.0003278417,0.0004018231,0.0003427357,0.00005269754],"category_scores_gemma":[0.00001857379,0.0008784478,0.0004730777,0.001433683,0.0001305218,0.004689895,0.0001156596,0.0006861963,0.00008208307],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006641269,"about_ca_system_score_gemma":0.0007756774,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002604944,"about_ca_topic_score_gemma":0.000120091,"domain_scores_codex":[0.9966406,0.0001671457,0.0006550392,0.001308349,0.0006363859,0.0005924896],"domain_scores_gemma":[0.9980175,0.00005106269,0.0005631128,0.0005465054,0.0001833307,0.0006384356],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.04752079,0.00877283,0.7648473,0.005509187,0.004079245,0.03939289,0.01190923,0.0003007673,0.06973663,0.00421451,0.01990584,0.02381077],"study_design_scores_gemma":[0.03395821,0.005189387,0.5994378,0.003994921,0.006213961,0.0001555835,0.01816751,0.002188943,0.02414393,0.003420842,0.2958579,0.007271007],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9588109,0.0001808742,0.0002041343,0.0002654789,0.000407542,0.001918909,0.003471471,0.0004838326,0.03425685],"genre_scores_gemma":[0.7155055,0.0003350044,0.0003347376,0.00004100205,0.00003801569,0.000001930319,0.03664774,0.0001198041,0.2469762],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.275952,"threshold_uncertainty_score":0.9993666,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01004407003012741,"score_gpt":0.1955201880131509,"score_spread":0.1854761179830234,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}