{"id":"W7062732622","doi":"","title":"Using Whole Genome Sequencing to Track Colibacillosis on Saskatchewan Broiler Flocks","year":2022,"lang":"en","type":"dissertation","venue":"University Library (University of Saskatchewan)","topic":"Advanced Power Generation Technologies","field":"Engineering","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Plasmid; Escherichia coli; Flock; Virulence; Whole genome sequencing; Pathogenic Escherichia coli; Nanopore sequencing; Outbreak","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005072699,0.0005215895,0.0003458014,0.0008246805,0.000632251,0.0006222089,0.0003629333,0.0004755666,0.001268706],"category_scores_gemma":[0.0007261324,0.0004038683,0.0003991113,0.0006996008,0.000249486,0.0002100749,0.0004705606,0.0006865744,0.0007774097],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001124943,"about_ca_system_score_gemma":0.001301058,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.09142378,"about_ca_topic_score_gemma":0.3599082,"domain_scores_codex":[0.9996414,0.00003722442,0.00001523764,0.0001493135,0.0001052848,0.00005140851],"domain_scores_gemma":[0.9992625,0.00007775719,0.00006961601,0.00005962385,0.000436778,0.00009371448],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0004598357,0.0001063471,0.1560184,0.0002227721,0.0003341238,0.0004272595,0.0007727335,0.00272965,0.7955862,0.0003102999,0.005191998,0.03784051],"study_design_scores_gemma":[0.00004287453,0.0003957665,0.8371634,0.0001396013,0.00028515,0.0003623524,0.001644683,0.01131612,0.1163679,0.0002751969,0.03192155,0.00008533704],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9537896,0.0006090305,0.0163033,0.000412475,0.00008974424,0.0002280139,0.0222815,0.0006156716,0.005670861],"genre_scores_gemma":[0.8133767,0.001323921,0.1074808,0.001510239,0.00002244414,0.0004475987,0.06391387,0.0004878147,0.01143669],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9085763,"threshold_uncertainty_score":0.1817833,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01228135433351065,"score_gpt":0.1891920174668665,"score_spread":0.1769106631333558,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}