{"id":"W7072063514","doi":"","title":"What is inside of the cacao seed we eat? A new approach to mining the cacao microbiome «Theobroma cacao»","year":2021,"lang":"en","type":"dissertation","venue":"eScholarship@McGill (McGill)","topic":"Food Chemistry and Fat Analysis","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada; Smithsonian Tropical Research Institute; Mitacs; McGill University; Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria; Smithsonian Institution","keywords":"Microbiome; Population; Identification (biology); Cultivar","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007357432,0.0003957351,0.0004293138,0.001099924,0.001630096,0.002255524,0.0003602912,0.0005790868,0.002654998],"category_scores_gemma":[0.001213005,0.0001907808,0.0003841888,0.001312933,0.0004457429,0.0007687507,0.0007250423,0.0008087835,0.0007492111],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004809891,"about_ca_system_score_gemma":0.001041281,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.007766678,"about_ca_topic_score_gemma":0.02252444,"domain_scores_codex":[0.999761,0.00002842939,0.000009766679,0.00009592296,0.00006883343,0.00003594334],"domain_scores_gemma":[0.9994442,0.0001853797,0.00009212289,0.00003335022,0.0001267515,0.0001181962],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000485758,0.0001907978,0.188445,0.002024416,0.0002078331,0.0008855895,0.01647905,0.0003818664,0.3653769,0.002262713,0.01442911,0.4088311],"study_design_scores_gemma":[0.0000279432,0.0004842051,0.6985712,0.0009179719,0.0003513912,0.001746488,0.0338876,0.002294754,0.04238619,0.005154043,0.2140283,0.0001498778],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9381731,0.02641445,0.01148808,0.00666019,0.0005964519,0.0002261651,0.004224123,0.0002543585,0.01196316],"genre_scores_gemma":[0.8383403,0.02432679,0.09436242,0.005562094,0.0005282832,0.0002974045,0.006200905,0.0002271244,0.03015461],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.007766678,"threshold_uncertainty_score":0.01544291,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02120326954885886,"score_gpt":0.2183404014753108,"score_spread":0.1971371319264519,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}