{"id":"W7074122800","doi":"","title":"Does complete plastid genome sequencing improve species discrimination and phylogenetic resolution in Araucaria?","year":2015,"lang":"en","type":"article","venue":"Civil War Book Review","topic":"Geological Studies and Exploration","field":"Earth and Planetary Sciences","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada; Arnold Arboretum; University of Edinburgh; Rural and Environment Science and Analytical Services Division; National Science Foundation","keywords":"Plastid; Phylogenetic tree; Nuclear gene; Genome; DNA barcoding; Coalescent theory; Clade; Monophyly; Lineage (genetic)","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004178877,0.0005623183,0.0009846579,0.001706495,0.0004602616,0.001341948,0.001043604,0.001277546,0.001844763],"category_scores_gemma":[0.007446392,0.0004788319,0.0006241308,0.0008823495,0.0009568356,0.001844605,0.001216282,0.001177731,0.001225404],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006623028,"about_ca_system_score_gemma":0.0006710613,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001871476,"about_ca_topic_score_gemma":0.008329801,"domain_scores_codex":[0.9987919,0.000357694,0.0001203441,0.0003989786,0.0001642631,0.0001667391],"domain_scores_gemma":[0.9960287,0.001409976,0.0006729758,0.0007657304,0.0006033379,0.0005193148],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001003665,0.00009295208,0.1331675,0.001377282,0.0003644786,0.0009830517,0.002882832,0.001725042,0.534668,0.002046981,0.002752553,0.3189356],"study_design_scores_gemma":[0.0001617642,0.0008883563,0.8176325,0.001808146,0.0004782349,0.003334257,0.002791848,0.01819759,0.05092236,0.01381758,0.08972197,0.0002454052],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9517859,0.01182005,0.02681358,0.00300523,0.0002256748,0.00005977046,0.00218095,0.0008255087,0.003283266],"genre_scores_gemma":[0.9411587,0.003406973,0.04950045,0.000961046,0.00008808744,0.00004695358,0.00358832,0.0001996579,0.001049837],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004178877,"threshold_uncertainty_score":0.02210033,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06158635846235967,"score_gpt":0.225577931626525,"score_spread":0.1639915731641653,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}