{"id":"W7074150555","doi":"","title":"De novo genome assembly of two tomato ancestors, Solanum pimpinellifolium and Solanum lycopersicum var. cerasiforme, by long-read sequencing","year":2021,"lang":"en","type":"article","venue":"Institutional Repositories DataBase (IRDB)","topic":"Prenatal Screening and Diagnostics","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Institute of Genetics; Bio-oriented Technology Research Advancement Institution; Japan Society for the Promotion of Science; University of California, Davis","keywords":"Solanum; Genome; Gene; Sequence assembly; Whole genome sequencing","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002751603,0.0002865624,0.0004435986,0.0000860457,0.000332662,0.0001001867,0.0001601989,0.0001318253,0.00004464013],"category_scores_gemma":[0.0009629973,0.0002748014,0.00009524391,0.0003147152,0.0003173284,0.000567505,0.0002456965,0.000312177,0.00001294695],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004054357,"about_ca_system_score_gemma":0.001645168,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001338028,"about_ca_topic_score_gemma":0.0001366558,"domain_scores_codex":[0.9978366,0.00005972187,0.0005223476,0.0005089017,0.0006061547,0.0004662315],"domain_scores_gemma":[0.9982499,0.0002523049,0.0001817304,0.0005249447,0.0003931254,0.0003979508],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0008177842,0.0008066327,0.2496145,0.001512398,0.0007026105,0.009323855,0.0006434899,0.0007293614,0.7022255,0.02120475,0.01136412,0.001055025],"study_design_scores_gemma":[0.00998524,0.001008832,0.08702553,0.004561969,0.001335931,0.03644366,0.00130485,0.002907514,0.7719121,0.0003270264,0.08106133,0.002126039],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.95884,0.005133835,0.02414112,0.0004142605,0.001026582,0.0002683509,0.002285033,0.0001467737,0.007744067],"genre_scores_gemma":[0.9849641,0.0002707217,0.00913488,0.0003955993,0.0008687355,0.00002249055,0.003734797,0.00002701364,0.0005816304],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1625889,"threshold_uncertainty_score":0.9999704,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0223381100208466,"score_gpt":0.2842745864844662,"score_spread":0.2619364764636196,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}