{"id":"W7074225190","doi":"","title":"Copy Number Variants Are Ovarian Cancer Risk Alleles at Known and Novel Risk Loci.","year":2022,"lang":"en","type":"article","venue":"Apollo (University of Cambridge)","topic":"Photorefractive and Nonlinear Optics","field":"Physics and Astronomy","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Medical Research and Materiel Command; National Center for Advancing Translational Sciences; National Institute of General Medical Sciences; University College London; Peter MacCallum Foundation; National Cancer Institute; National Health and Medical Research Council; Medical Research Council; National Institutes of Health; Hellenic Health Foundation; Institut Gustave-Roussy; Kræftens Bekæmpelse; Cancer Council Victoria; Deutsche Krebshilfe; Canadian Institutes of Health Research; Cancerfonden; Institut National de la Santé et de la Recherche Médicale; European Commission; Roswell Park Cancer Institute; National Institute for Health and Care Research; Associazione Italiana per la Ricerca sul Cancro; Cancer Research UK; U.S. Department of Defense; Radboud Universiteit; Lon V. Smith Foundation; University of Cambridge; Fred C. and Katherine B. Andersen Foundation; Ovarian Cancer Research Fund; Bundesministerium für Bildung und Forschung; Ovarian Cancer Australia; Swedish Cancer Foundation; World Cancer Research Fund; Wellcome Trust; Pomorski Uniwersytet Medyczny W Szczecinie; Ligue Contre le Cancer; Vanderbilt University Medical Center; Deutsches Krebsforschungszentrum; Mayo Foundation for Medical Education and Research; Minnesota Ovarian Cancer Alliance; Moffitt Cancer Center; Vanderbilt University; University of Pittsburgh; NordForsk; Vetenskapsrådet; Georgia Clinical and Translational Science Alliance; Oak Foundation; Cancer Australia; Pfizer; Instituto de Salud Carlos III; Amgen","keywords":"Copy-number variation; Ovarian cancer; Allele; Odds ratio; Single-nucleotide polymorphism; Genetic association; Genome-wide association study; Population","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001377129,0.000143205,0.0002484291,0.00004668047,0.000738178,0.00001151695,0.0001958366,0.00003458637,0.001783432],"category_scores_gemma":[0.000004171254,0.0001796649,0.0001107972,0.0001610599,0.0001117795,0.0001494347,0.0003931331,0.0002796719,0.000028233],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008996956,"about_ca_system_score_gemma":0.0000834895,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01874929,"about_ca_topic_score_gemma":0.0003368785,"domain_scores_codex":[0.9991356,0.00007845001,0.00009502914,0.0002793941,0.0001952737,0.0002162293],"domain_scores_gemma":[0.99922,0.00006823158,0.000320812,0.0002167787,0.00006771043,0.0001064758],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003350689,0.0004176397,0.9726118,0.00001476218,0.0006443387,0.00001511396,0.001114093,0.0001068004,0.00191691,0.003220007,0.01632189,0.003281605],"study_design_scores_gemma":[0.006183774,0.0001683432,0.7292781,0.00002981294,0.000724168,0.000009731175,0.01372917,0.004177854,0.003419011,0.0003908969,0.2410405,0.0008485599],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9859589,0.0000482316,0.003361794,0.0001429319,0.0001082748,0.0001379266,0.004106365,0.00001656059,0.006119027],"genre_scores_gemma":[0.9934248,0.0001011509,0.0008964145,0.00003028316,0.00009803141,0.000001252575,0.00008039334,0.00001612487,0.005351589],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2433336,"threshold_uncertainty_score":0.9991291,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008777912473267622,"score_gpt":0.2157808296072481,"score_spread":0.2070029171339805,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}