{"id":"W7077885043","doi":"10.5281/zenodo.16953437","title":"DEPRECATED Enformer (Human) Model Predictor (Avsec et al. 2021) using the Genomic API for Model Evaluation (GAME) Framework","year":2025,"lang":"en","type":"other","venue":"Zenodo (CERN European Organization for Nuclear Research)","topic":"Geochemistry and Geologic Mapping","field":"Computer Science","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia Hospital","funders":"","keywords":"Epigenomics; Scripting language; Container (type theory); Chromatin; Transcription (linguistics); Source code; Expression (computer science); Histone","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001417093,0.002171216,0.0008601926,0.0006432796,0.0004342777,0.001443442,0.002942105,0.001280714,0.06215551],"category_scores_gemma":[0.004996836,0.001246547,0.001768863,0.0004203878,0.0003987494,0.001441891,0.001965442,0.003369511,0.02901224],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0009211106,"about_ca_system_score_gemma":0.001578872,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00748431,"about_ca_topic_score_gemma":0.01634072,"domain_scores_codex":[0.9994465,0.0001274844,0.00002604261,0.0001771556,0.0001527052,0.00007005048],"domain_scores_gemma":[0.9992062,0.0003750782,0.00003989609,0.000207431,0.0001163613,0.00005502406],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.000777945,0.0002213262,0.005517077,0.0009988463,0.0005369968,0.0003562368,0.0001884411,0.07150499,0.007550773,0.0196361,0.7622383,0.1304729],"study_design_scores_gemma":[0.0003098337,0.0001777438,0.001688341,0.0001109472,0.00009066031,0.0001893512,0.00004059439,0.8152604,0.01586635,0.02241865,0.1437652,0.00008190414],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"genre_codex":"software","genre_gemma":"other","genre_scores_codex":[0.01247525,0.0006635274,0.3767512,0.0007661384,0.0005956313,0.0002367267,0.04066171,0.5550826,0.01276716],"genre_scores_gemma":[0.1705531,0.0005956986,0.4858078,0.001900256,0.0001785824,0.001682049,0.1420891,0.1623608,0.03483264],"genre_candidate":"other","genre_consensus":null,"teacher_disagreement_score":0.06215551,"threshold_uncertainty_score":0.2079309,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06140186557834146,"score_gpt":0.2973582245923241,"score_spread":0.2359563590139827,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}