{"id":"W7083594098","doi":"10.1017/ash.2025.388","title":"Wastewater-based surveillance of Bordetella pertussis during an outbreak in Alberta, Canada","year":2025,"lang":"en","type":"article","venue":"Antimicrobial Stewardship & Healthcare Epidemiology","topic":"Historical and Archaeological Studies","field":"Arts and Humanities","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta; University of Calgary","funders":"","keywords":"Outbreak; Whooping cough; Bordetella pertussis; Vaccination; Epidemiology; Transmission (telecommunications)","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006943957,0.0002957059,0.00116807,0.0001485583,0.0004065995,0.000006620629,0.00034766,0.0001603688,0.0001749699],"category_scores_gemma":[0.0007053595,0.0002332049,0.0001366735,0.0001435677,0.0006130044,0.00005459198,0.0001408957,0.0003546392,0.000005504378],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003291031,"about_ca_system_score_gemma":0.0004551365,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9584207,"about_ca_topic_score_gemma":0.9945245,"domain_scores_codex":[0.9962552,0.001150131,0.001094067,0.000568946,0.0001028259,0.0008288234],"domain_scores_gemma":[0.9974427,0.001687199,0.0002412254,0.0003215656,0.0001561387,0.0001511471],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0008130561,0.0005056155,0.9013532,0.001873786,0.0001156965,0.00005917151,0.008023355,0.0003698748,0.0005436105,0.0747061,0.00597248,0.005664007],"study_design_scores_gemma":[0.003562108,0.00154564,0.4437503,0.001012331,0.00005474709,0.0000114165,0.00317739,0.0004983234,0.003318229,0.00696197,0.5342419,0.001865715],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9551169,0.0007058484,0.000009773579,0.03980855,0.001070332,0.0002785033,0.0001163807,0.00003806839,0.002855639],"genre_scores_gemma":[0.992865,0.0001258639,0.00008765006,0.004998425,0.0001842659,0.00002292915,0.00004508644,0.00001512247,0.001655662],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5282694,"threshold_uncertainty_score":0.9509822,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03750709398922598,"score_gpt":0.2797465563946823,"score_spread":0.2422394624054563,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}