{"id":"W7097799538","doi":"","title":"RESEARCH ARTICLE Typing ofMycobacterium avium Subspecies paratuberculosis Isolates from Newfoundland Using Fragment Analysis","year":2016,"lang":"en","type":"article","venue":"","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Subspecies; Genotyping; Typing; Fragment (logic); Paratuberculosis; Microsatellite; Mycobacterium avium subspecies paratuberculosis","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004300384,0.0002715448,0.0002163274,0.001109004,0.0006206521,0.0006366185,0.000286481,0.0002630288,0.001626877],"category_scores_gemma":[0.0008667182,0.0001375718,0.0001968893,0.0006004148,0.0003237968,0.0002597797,0.0003420581,0.0002711792,0.0002834777],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00122064,"about_ca_system_score_gemma":0.001174831,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.1939968,"about_ca_topic_score_gemma":0.3963918,"domain_scores_codex":[0.9994893,0.00005242872,0.00006063063,0.0001132379,0.0001447196,0.0001395361],"domain_scores_gemma":[0.9990078,0.0001668205,0.0003251834,0.00007030048,0.0002799489,0.0001498922],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003450948,0.0001158571,0.8501044,0.0001836048,0.00007029568,0.001266897,0.001027179,0.0001906597,0.1141165,0.00004004754,0.0008118171,0.03172766],"study_design_scores_gemma":[0.000007192587,0.000115078,0.9868635,0.00004552228,0.00004044509,0.001794358,0.0004372609,0.000128874,0.008343611,0.000007428502,0.002209733,0.000007034291],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9956239,0.000644209,0.0008642926,0.0001132838,0.00001459144,0.00003439937,0.0009772502,0.00002458665,0.001703505],"genre_scores_gemma":[0.9908013,0.0006518311,0.004131946,0.000162411,0.00002756442,0.00002363164,0.002246044,0.0000131002,0.001942241],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8060032,"threshold_uncertainty_score":0.3857353,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.07124018055775694,"score_gpt":0.366110556632282,"score_spread":0.294870376074525,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}