{"id":"W7103408590","doi":"","title":"New Species and Emendations of &lt;em&gt;Orphella&lt;/em&gt;: Taxonomic and Phylogenetic Reassessment of the Genus to Establish the Orphellales, for Stonefly Gut Fungi with a Twist","year":2018,"lang":"","type":"article","venue":"Scholar Works  (Boise State University)","topic":"Infectious Diseases and Mycology","field":"Veterinary","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Vicariance; Phylogenetic tree; Taxon; Lineage (genetic); Phylogenetics; Taxonomy (biology); Genus","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004640214,0.0004741514,0.0005734306,0.0004254957,0.001165339,0.0002637688,0.0006348699,0.0001816993,0.0006582384],"category_scores_gemma":[0.00007930782,0.0003830494,0.0001984351,0.001041482,0.0008147723,0.0004122636,0.0007780928,0.00038104,0.00001312472],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002710709,"about_ca_system_score_gemma":0.0007345598,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002283275,"about_ca_topic_score_gemma":0.003634022,"domain_scores_codex":[0.9973835,0.0004211923,0.0004824665,0.0007631768,0.0003033987,0.0006462549],"domain_scores_gemma":[0.9971724,0.0002740139,0.0006001999,0.0008931821,0.0006751255,0.0003850363],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.05482967,0.004404907,0.08357349,0.003146956,0.01217209,0.0006479954,0.04448132,0.004087201,0.1326657,0.07921734,0.04828987,0.5324835],"study_design_scores_gemma":[0.007797887,0.008255891,0.2040046,0.0008957203,0.002969557,0.0001443588,0.01318043,0.0006261183,0.0008712803,0.0005779194,0.7593651,0.001311206],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.984354,0.002197434,0.005843969,0.0002231419,0.000451673,0.002456133,0.000961361,0.00002571422,0.003486567],"genre_scores_gemma":[0.9881649,0.002490682,0.002835007,0.0001131377,0.000161146,0.000009526485,0.00002448382,0.0000547863,0.006146357],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7110752,"threshold_uncertainty_score":0.9998621,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01611351563329943,"score_gpt":0.2294262252142082,"score_spread":0.2133127095809088,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}