{"id":"W7115394181","doi":"","title":"Technical advance: Transcription factor, promoter, and enhancer utilization in human myeloid cells","year":2015,"lang":"en","type":"article","venue":"University of Regensburg Publication Server (University of Regensburg)","topic":"Single-cell and spatial transcriptomics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Centre for Global Health Research","funders":"","keywords":"Enhancer; Myelopoiesis; Enhancer RNAs; Transcription (linguistics); Transcription factor; Myeloid; IRF8; Transcriptome; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002243945,0.0001625891,0.0002579633,0.000230556,0.000113765,0.00001001584,0.0003327802,0.000284686,0.00005486086],"category_scores_gemma":[0.00001852137,0.0002254854,0.0001095416,0.0003272376,0.0002918262,0.00008551099,0.00009587062,0.000124472,0.000002442927],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007639674,"about_ca_system_score_gemma":0.000122846,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000429847,"about_ca_topic_score_gemma":0.0007608756,"domain_scores_codex":[0.9988552,0.00009753567,0.0001784756,0.0004353873,0.0002372986,0.0001960493],"domain_scores_gemma":[0.998735,0.000008542941,0.0002270411,0.0003765934,0.0004951951,0.0001576431],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002688681,0.0002056467,0.006170358,0.00007971531,0.00002939434,0.000003925824,0.001007292,0.0000513214,0.9870041,0.000391766,0.001127632,0.003659955],"study_design_scores_gemma":[0.009113957,0.001264437,0.05793121,0.0002293301,0.0001853031,0.00002316844,0.006320298,0.0007548429,0.7580886,0.000381521,0.1645716,0.001135794],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9799263,0.0006027076,0.01810187,0.0003888056,0.00006694097,0.0003212646,0.00004275968,0.00003064354,0.0005186767],"genre_scores_gemma":[0.9946943,0.0007560871,0.002107265,0.00001906059,0.00001901432,1.258601e-7,0.0001886196,0.00001340565,0.002202145],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2289156,"threshold_uncertainty_score":0.9195027,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0295961857916305,"score_gpt":0.2286994175159882,"score_spread":0.1991032317243577,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}