{"id":"W7115568888","doi":"10.17605/osf.io/ms37w","title":"Genetic diversity and molecular epidemiology of Mycobacterium tuberculosis complex clinical isolates in New Brunswick, Canada – A retrospective chart review","year":2025,"lang":"","type":"article","venue":"Open Science Framework","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Molecular epidemiology; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; Genetic diversity; Epidemiology; Molecular diagnostics; Tuberculosis; Diversity (politics)","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001479536,0.0005879147,0.0009667115,0.007417812,0.002282853,0.001868979,0.002647149,0.0007469371,0.001991359],"category_scores_gemma":[0.005399848,0.0008335353,0.000863185,0.02233881,0.0008740582,0.0005994561,0.001123151,0.0007600765,0.0005001909],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.05030492,"about_ca_system_score_gemma":0.08789112,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9960846,"about_ca_topic_score_gemma":0.9965366,"domain_scores_codex":[0.9964662,0.0001736746,0.0005931621,0.0006293974,0.001402193,0.0007355117],"domain_scores_gemma":[0.9870193,0.0005630436,0.002082727,0.0005218264,0.008625905,0.001187156],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001144216,0.00002352834,0.9859227,0.0003006703,0.0001439385,0.0002458929,0.0005858439,0.0002525538,0.0003598154,0.0001501398,0.006409659,0.005490694],"study_design_scores_gemma":[0.00001048832,0.00001427403,0.9951667,0.0001420501,0.00006321664,0.0001266145,0.0006788222,0.0001873324,0.0001481575,0.00001430376,0.003428778,0.00001935439],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7504443,0.008745613,0.0005586263,0.0008780754,0.00009129843,0.0006232304,0.2322897,0.00008769532,0.006281415],"genre_scores_gemma":[0.9388681,0.005749402,0.00121935,0.0007151667,0.00003740689,0.0003680204,0.0497719,0.00004215315,0.003228489],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05030492,"threshold_uncertainty_score":0.3649895,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06694604139138481,"score_gpt":0.4080574287742754,"score_spread":0.3411113873828906,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}