{"id":"W7116066548","doi":"10.3390/microorganisms14010009","title":"Streptococcus dysgalactiae subsp. equisimilis from Diseased Pigs Are Genetically Distinct from Human Strains and Associated with Multidrug Resistance","year":2025,"lang":"en","type":"article","venue":"Microorganisms","topic":"Streptococcal Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto; Ontario Institute for Cancer Research; Ministère de l'Agriculture, des Pêcheries et de l'Alimentation; Université de Montréal; Hospital for Sick Children; Cegep de Saint Hyacinthe","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Phylogenetic tree; Multiple drug resistance; Clade; Population; Gene; Phylogenetics; Antibiotic resistance; Genome","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001504771,0.0002680325,0.0002161509,0.000460791,0.0003074123,0.0004175902,0.00009947405,0.0002209895,0.0006598422],"category_scores_gemma":[0.0002322843,0.0001163304,0.000168101,0.0005411405,0.0002537332,0.0000904373,0.0001959026,0.0002448049,0.0001534367],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003880683,"about_ca_system_score_gemma":0.0004256313,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0270754,"about_ca_topic_score_gemma":0.04500724,"domain_scores_codex":[0.999861,0.00001003889,0.00001122299,0.00004197038,0.00002742277,0.0000483407],"domain_scores_gemma":[0.9998504,0.00002064185,0.00004394458,0.00001774365,0.00003578281,0.00003148449],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0005694329,0.0001032472,0.6240036,0.00008682106,0.00008149289,0.001610783,0.001105034,0.0002242563,0.3553919,0.0001626123,0.0004435215,0.01621731],"study_design_scores_gemma":[0.000004760843,0.00008588404,0.992323,0.00001166844,0.00001908076,0.001130241,0.0004603317,0.0001652915,0.004525352,0.00002148461,0.001247072,0.000005767095],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9987,0.0001437587,0.0002400509,0.00002198351,0.000003037843,0.000009338671,0.0003956538,0.000005167929,0.000480823],"genre_scores_gemma":[0.996868,0.0001609118,0.000490876,0.00004980635,0.000004939729,0.000006769319,0.001917243,0.000004442452,0.0004969577],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0270754,"threshold_uncertainty_score":0.05383563,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01133188572786391,"score_gpt":0.2616308521434151,"score_spread":0.2502989664155512,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}