{"id":"W7116672714","doi":"10.64898/2025.12.18.694438","title":"Extraction method dominates phytochemical profiles of aromatic medicinal herbs: a comparative HPTLC study","year":2025,"lang":"","type":"article","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Essential Oils and Antimicrobial Activity","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"","keywords":"Phytochemical; Extraction (chemistry); Decoction; Tincture (heraldry); Silica gel; Essential oil","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001086841,0.0005477765,0.001133891,0.00009388211,0.0004030284,0.0001567034,0.0005168111,0.0003106333,0.0002055457],"category_scores_gemma":[0.0002435021,0.0003020921,0.0002553896,0.001514598,0.0003768184,0.00040202,0.0001921218,0.0005066087,0.0000249911],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001095063,"about_ca_system_score_gemma":0.000152736,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000468706,"about_ca_topic_score_gemma":0.00002773763,"domain_scores_codex":[0.9963996,0.0006936497,0.0009363626,0.000946328,0.0004461137,0.000577988],"domain_scores_gemma":[0.9977161,0.0006979901,0.0006862805,0.000271622,0.0004298408,0.0001981864],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002098255,0.003065729,0.009158064,0.0002738518,0.0002843887,0.00001732367,0.00005236071,0.000003875097,0.9864752,0.0001942493,0.0002045169,0.00006057276],"study_design_scores_gemma":[0.000634047,0.0005308337,0.2200874,0.0006387093,0.0003000073,2.6879e-8,0.0001843185,0.0002575788,0.7766494,0.000006302691,0.0003296676,0.000381745],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.995979,0.000766208,0.000433,0.0006477628,0.0006788729,0.001293845,0.00007680562,0.00008860527,0.00003587057],"genre_scores_gemma":[0.9976936,0.00007770686,0.001713728,0.00007027136,0.0003388692,0.0000790324,2.235913e-7,0.000006361249,0.00002018978],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2109293,"threshold_uncertainty_score":0.9999431,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01940504617452314,"score_gpt":0.2811409868560734,"score_spread":0.2617359406815502,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}