{"id":"W7116749084","doi":"10.3390/microorganisms14010019","title":"CRISPR/Cas9 Knockout Studies Implicate Phenazine-1-carboxylic Acid, but Not 2-Hydroxy Phenazine, in the Biocontrol Activity of Pseudomonas chlororaphis Subsp. phenazini Strain S1Bt23 Against Pythium arrhenomanes (Drechsler)","year":2025,"lang":"en","type":"article","venue":"Microorganisms","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Blood Services; University of Ottawa; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada","keywords":"Pseudomonas chlororaphis; Strain (injury); Mutant; Antagonism; Gene knockout; Gene; Pseudomonas; Overproduction; Pathogen","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0008454553,0.0005659009,0.0008508597,0.0001311867,0.0005471929,0.0001537511,0.001135239,0.000266426,0.000125933],"category_scores_gemma":[0.0001873446,0.0002473063,0.0003400409,0.001223486,0.0003713548,0.0003169694,0.0003198644,0.0006874314,0.00006637154],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001367912,"about_ca_system_score_gemma":0.00005595442,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00106159,"about_ca_topic_score_gemma":0.002561599,"domain_scores_codex":[0.9969977,0.0004519473,0.0007940693,0.0007055123,0.0002855108,0.0007652204],"domain_scores_gemma":[0.9981817,0.0006970477,0.0004026194,0.0003768876,0.000252852,0.00008890853],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001855615,0.0004899389,0.0006832578,0.00004874947,0.0001852507,0.00001949438,0.0005480592,0.000003547601,0.97689,0.0001131024,0.0009935059,0.01983953],"study_design_scores_gemma":[0.0009104223,0.0002235886,0.0724045,0.0001513578,0.00009788739,0.0000521727,0.003574801,0.00005294885,0.9155781,0.0004535455,0.005976016,0.0005246268],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9895183,0.001314808,0.0000315852,0.005988488,0.0003827828,0.0008332443,0.0009293299,0.0001139018,0.0008876001],"genre_scores_gemma":[0.9971063,0.0006915729,0.00006419273,0.001299995,0.0001659169,0.00009864783,0.000134506,0.000007429901,0.0004315058],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07172125,"threshold_uncertainty_score":0.9999979,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02473593252912851,"score_gpt":0.2605745993781498,"score_spread":0.2358386668490212,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}