{"id":"W7117293275","doi":"10.1016/j.pld.2025.12.012","title":"Genomic insights into alpine plant adaptation","year":2025,"lang":"en","type":"article","venue":"Plant Diversity","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"National Key Research and Development Program of China; National Natural Science Foundation of China","keywords":"Adaptation (eye); Transposable element; Convergent evolution; Genomics; Genome; Biodiversity; Structural variation; Phenotypic plasticity; Functional genomics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00003118466,0.00005669906,0.00006749374,0.00001064903,0.0004547775,0.00001684425,0.0001345238,0.00003996211,0.0001894052],"category_scores_gemma":[0.000008924796,0.00002350461,0.0000318048,0.0001264152,0.00001514284,0.00003881003,0.000212277,0.00003959297,0.00005507968],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002578665,"about_ca_system_score_gemma":0.000006932565,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001410478,"about_ca_topic_score_gemma":0.004877828,"domain_scores_codex":[0.9996121,0.00002022371,0.00006659207,0.0001387627,0.00007552512,0.00008681497],"domain_scores_gemma":[0.9998356,0.00006121657,0.00002471389,0.00002468463,0.00001898151,0.00003483838],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002995449,0.000565659,0.4323112,0.0000430514,0.0002301375,0.00007032807,0.007114646,0.0004238122,0.4488994,0.02497809,0.016549,0.06851516],"study_design_scores_gemma":[0.0001627989,0.00005518142,0.931133,0.00001327382,0.00002664599,0.000001904779,0.0003549496,0.001524569,0.001133101,0.00448978,0.06098777,0.0001170498],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9972045,0.000109186,0.00002602877,0.0006952449,0.0001600969,0.00007780009,0.0001419503,0.00003624041,0.00154899],"genre_scores_gemma":[0.9989675,0.00006346161,0.00007399335,0.0002018321,0.00005502728,0.00000132131,0.0003731879,1.032243e-7,0.0002635334],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4988218,"threshold_uncertainty_score":0.3497826,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02115966989520166,"score_gpt":0.1826686178193419,"score_spread":0.1615089479241403,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}