{"id":"W7117540257","doi":"10.1128/mbio.03701-25","title":"Carbon starvation induces coincident capsule and cell wall remodeling in <i>Cryptococcus neoformans</i>","year":2025,"lang":"en","type":"article","venue":"mBio","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"University of California, San Francisco; National Institutes of Health; Canadian Institute for Advanced Research","keywords":"Capsule; Polysaccharide; Cell wall; Cell; Carbon fibers; Immune system; Enzyme; Mutant","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009000953,0.000354297,0.0002297885,0.0002012896,0.0002030746,0.0004016627,0.0001950178,0.0003084907,0.0008901521],"category_scores_gemma":[0.0001762942,0.0001452686,0.000277578,0.0001894526,0.0002590858,0.0001382048,0.0003042557,0.0005342008,0.0003826702],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005441938,"about_ca_system_score_gemma":0.0002968159,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004226479,"about_ca_topic_score_gemma":0.0046933,"domain_scores_codex":[0.999799,0.00001457489,0.00001469547,0.00005184741,0.00006224383,0.00005782089],"domain_scores_gemma":[0.9998324,0.00001999176,0.00006037012,0.00001792257,0.000027679,0.00004161593],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003814168,0.000007290284,0.0003238653,0.00001605415,0.000001464291,0.00002375054,0.000004767967,0.00002021101,0.9992489,0.0000113623,0.00002752768,0.0002766684],"study_design_scores_gemma":[0.000006113048,0.0001138687,0.05016224,0.00001290535,0.000008492203,0.0002980763,0.00009620986,0.001089584,0.9465472,0.00004799626,0.001604439,0.00001284589],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9946882,0.0003968755,0.00140657,0.0001404451,0.00002601761,0.0000259418,0.001994125,0.0001365409,0.00118543],"genre_scores_gemma":[0.994759,0.0001547548,0.00162468,0.000150204,0.00000555061,0.00002601272,0.001812262,0.0000398574,0.001427628],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004226479,"threshold_uncertainty_score":0.008403778,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01125331952154149,"score_gpt":0.2565730347591267,"score_spread":0.2453197152375853,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}