{"id":"W7128232988","doi":"10.21203/rs.3.rs-6429255/v1","title":"T cell-mediated clearance of porcine reproductive and respiratory syndrome virus (PRRSV) from the lung characterized by machine learning analysis in vaccinated and unvaccinated pigs","year":2025,"lang":"","type":"preprint","venue":"Research Square","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":false,"ca_institutions":"Boehringer Ingelheim (Canada)","funders":"","keywords":"Porcine reproductive and respiratory syndrome virus; Immune system; Lung; Vaccination; Heterologous; Virus; Respiratory system","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002384421,0.0001609532,0.0003425587,0.0002011717,0.0001185813,0.0002536867,0.0001871055,0.0003590244,0.0006814399],"category_scores_gemma":[0.0004884639,0.0001073381,0.0003272082,0.00008446883,0.0001596911,0.0001700455,0.00006631691,0.0003833813,0.000153186],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002540607,"about_ca_system_score_gemma":0.0001518082,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009053439,"about_ca_topic_score_gemma":0.0004002567,"domain_scores_codex":[0.9998667,0.00002685597,0.00000772252,0.0000357674,0.00001891595,0.00004388603],"domain_scores_gemma":[0.9998056,0.00009508256,0.00003007551,0.00001572152,0.00002532547,0.00002824129],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.004377951,0.000454925,0.03228104,0.00006403234,0.00004717272,0.0001500237,0.00007273191,0.002987311,0.9487568,0.0001094815,0.0001565937,0.01054203],"study_design_scores_gemma":[0.0001559871,0.009020298,0.6448051,0.00001394406,0.0001048619,0.001032266,0.0002195325,0.05515182,0.2884887,0.0003344392,0.0006451189,0.00002794447],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.99959,0.00005713214,0.0001731393,0.000007479569,0.000004181932,0.000004942675,0.00006409661,0.00000380794,0.00009518316],"genre_scores_gemma":[0.9992262,0.00003732318,0.000148051,0.00001309411,0.000004233098,0.000009745326,0.0002709901,0.000001744597,0.0002884762],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009053439,"threshold_uncertainty_score":0.002279639,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03245999926319573,"score_gpt":0.3147457945094233,"score_spread":0.2822857952462276,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}