{"id":"W7128507654","doi":"10.26108/gse9-2j57","title":"Full Genome of Phialocephala scopiformis DAOMC 229536, a Fungal Endophyte of Spruce Producing the Potent Anti-Insectan Compound Rugulosin","year":2016,"lang":"en","type":"article","venue":"AcadiaU-DEV","topic":"Microbial Natural Products and Biosynthesis","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Endophyte; Metabolite; Genome; Strain (injury); Secondary metabolite; Whole genome sequencing; Colonization","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006115047,0.0002854385,0.0006516473,0.0001651391,0.000118681,0.00001393509,0.0003559674,0.0001527835,0.0002386487],"category_scores_gemma":[0.0003738948,0.0001458653,0.0002097633,0.0003902648,0.0003545059,0.0001445102,0.0001303578,0.0002641165,0.00004419831],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008261546,"about_ca_system_score_gemma":0.0001683122,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002178428,"about_ca_topic_score_gemma":0.00002354225,"domain_scores_codex":[0.9978838,0.00009025797,0.0006541652,0.0005114457,0.0004026772,0.0004576542],"domain_scores_gemma":[0.9982948,0.0001671722,0.000369225,0.0007677571,0.0002641743,0.0001368606],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000417613,0.0001411424,0.002029378,0.0002897686,0.0001540867,0.00002140685,0.0003381177,0.000001176126,0.9862694,0.0001858455,0.0007643522,0.009387699],"study_design_scores_gemma":[0.001413767,0.0005009525,0.04437095,0.0006771463,0.0002261626,0.0002426986,0.00005900516,0.000005393293,0.9442766,0.00011509,0.007856726,0.0002555629],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9887558,0.00234364,0.0000220704,0.006582631,0.0003160001,0.0008555533,0.0001136039,0.00004166133,0.0009690447],"genre_scores_gemma":[0.9972188,0.0005877756,0.0004274208,0.0003214345,0.0007975226,0.000002772146,0.000009469833,0.00003982848,0.0005949412],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.04234157,"threshold_uncertainty_score":0.5948213,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01514746300402913,"score_gpt":0.2338520467538571,"score_spread":0.218704583749828,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}