{"id":"W7132867609","doi":"","title":"Defining the Pre-clinical state of Crohn&apos;s Disease as a Window into Pathogenesis","year":2022,"lang":"","type":"dissertation","venue":"TSpace","topic":"Inflammatory Bowel Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Odds ratio; Quartile; Confidence interval; Gut flora; Microbiome; Disease; Logistic regression; Cohort study; Confounding","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001464255,0.00038591,0.0003954988,0.0007538185,0.0002327137,0.001126144,0.0003406779,0.0005570705,0.00252889],"category_scores_gemma":[0.003168472,0.000169788,0.00025232,0.0006797545,0.0007647131,0.001172683,0.0006760986,0.0008060774,0.0002627486],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002830448,"about_ca_system_score_gemma":0.0004374236,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006536959,"about_ca_topic_score_gemma":0.0006517827,"domain_scores_codex":[0.9995906,0.0001835168,0.00003221166,0.00007942646,0.00006559701,0.00004875955],"domain_scores_gemma":[0.9969923,0.001145082,0.001291439,0.0001432247,0.0001435165,0.0002843787],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"theoretical_or_conceptual","study_design_scores_codex":[0.0007504475,0.00007448078,0.9709745,0.0002028312,0.00007938128,0.0004632646,0.0002466978,0.0004026765,0.003282295,0.001242029,0.00048774,0.02179365],"study_design_scores_gemma":[0.00001835741,0.0005310799,0.9872874,0.0001431104,0.00009406145,0.00279473,0.0003542731,0.001906698,0.0007799385,0.003346894,0.002724749,0.00001869286],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.982892,0.01008455,0.00317375,0.001442839,0.0000666873,0.0000199919,0.0003768205,0.00003183435,0.001911537],"genre_scores_gemma":[0.9955376,0.002140457,0.001538564,0.000134954,0.0001497076,0.000009991331,0.0002087426,0.00000498661,0.000275139],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00252889,"threshold_uncertainty_score":0.008459926,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01240781801929325,"score_gpt":0.3614705892860731,"score_spread":0.3490627712667799,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}