{"id":"W7132883117","doi":"","title":"Genome Graphs","year":2010,"lang":"en","type":"dissertation","venue":"TSpace","topic":"Genome Rearrangement Algorithms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"","keywords":"Genome; Hybrid genome assembly; Shotgun sequencing; DNA sequencing; Reference genome; Genomics; Sequence (biology); Sequence assembly","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006038826,0.001545034,0.0009215807,0.003260179,0.00173083,0.003804507,0.00221245,0.001859412,0.07331622],"category_scores_gemma":[0.004667233,0.0006934789,0.001965678,0.004812581,0.000814405,0.004661858,0.002726437,0.001970893,0.03144655],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001747194,"about_ca_system_score_gemma":0.001577448,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005237587,"about_ca_topic_score_gemma":0.004195174,"domain_scores_codex":[0.9984533,0.000271592,0.0001006952,0.0006687809,0.0003423391,0.0001632986],"domain_scores_gemma":[0.9982178,0.0005801274,0.0001528957,0.0004629728,0.0004553971,0.0001307914],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.0001958876,0.0001043789,0.001570279,0.001091119,0.0001513224,0.0006418056,0.0004625308,0.0145439,0.004684187,0.5538838,0.2534245,0.1692463],"study_design_scores_gemma":[0.00003255621,0.00002524206,0.0005159794,0.0001215054,0.00004507425,0.000475605,0.0001603208,0.01064998,0.001414221,0.2965266,0.6899957,0.00003725279],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"genre_codex":"methods","genre_gemma":"empirical","genre_scores_codex":[0.01060049,0.005032701,0.6332873,0.004999092,0.001684103,0.0008811103,0.1357139,0.0186556,0.1891457],"genre_scores_gemma":[0.1286441,0.009947326,0.4185855,0.004166421,0.0007209988,0.001638592,0.3142613,0.004688558,0.1173473],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.07331622,"threshold_uncertainty_score":0.2452672,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008151719719698882,"score_gpt":0.2892867902876959,"score_spread":0.2811350705679971,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}