{"id":"W7133014295","doi":"","title":"Diversity, Relative Abundance, and Functional Potential of Viral and Bacterial Communities","year":2022,"lang":"","type":"dissertation","venue":"TSpace","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada; Environment and Climate Change Canada; York University","keywords":"Metagenomics; Virus classification; Taxon; DNA virus; Host (biology); Phylogenetics; Taxonomy (biology)","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001573381,0.0001509948,0.0002390839,0.001012587,0.0006706425,0.0009234599,0.0002259144,0.0001899848,0.001162629],"category_scores_gemma":[0.0003038456,0.0002629448,0.0002323386,0.0008895738,0.0004247384,0.0003962364,0.0004964402,0.000221098,0.0003091602],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0009177169,"about_ca_system_score_gemma":0.000907082,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01816121,"about_ca_topic_score_gemma":0.05616019,"domain_scores_codex":[0.9997991,0.0000132209,0.000009238637,0.00005408241,0.00008168413,0.00004271015],"domain_scores_gemma":[0.9998221,0.00004275135,0.00003618899,0.000007478239,0.00005759262,0.00003393217],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000238668,0.00004728433,0.4035496,0.0003713583,0.00007053305,0.0002637266,0.00399171,0.001353058,0.5324349,0.001176744,0.0003350559,0.05616748],"study_design_scores_gemma":[0.000003397555,0.0002500629,0.9652359,0.00003045077,0.0000360868,0.0001364752,0.002192693,0.001489044,0.02673767,0.0003030345,0.003561688,0.000023467],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"other","genre_scores_codex":[0.9953592,0.000337941,0.001056456,0.00002599691,0.00000251691,0.00002657331,0.0005971659,0.00001506717,0.002579094],"genre_scores_gemma":[0.9912108,0.0006562051,0.003471922,0.00002086976,0.000003341936,0.00004620005,0.0007900996,0.00001277728,0.00378796],"genre_candidate":"other","genre_consensus":null,"teacher_disagreement_score":0.01816121,"threshold_uncertainty_score":0.036111,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01403266135463075,"score_gpt":0.2624341794029106,"score_spread":0.2484015180482798,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}