{"id":"W7155177636","doi":"10.33545/26646064.2025.v7.i11b.488","title":"Next-generation sequencing based identification of novel resistance genes in wild tomato species","year":2025,"lang":"","type":"article","venue":"International Journal of Agriculture and Nutrition","topic":"Plant Pathogens and Resistance","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Genome Prairie; Columbia Bible College","funders":"","keywords":"Introgression; Phytophthora infestans; Gene; Genome; Plant disease resistance; Solanum; Identification (biology); Cloning (programming); R gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004228234,0.000166214,0.0003003286,0.0001576482,0.0001010303,0.000188457,0.0002965626,0.0001761837,0.00001898579],"category_scores_gemma":[0.00006901455,0.00008180197,0.0001528907,0.0004693458,0.00007887348,0.0004751486,0.00002799266,0.0001722702,4.315649e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001591396,"about_ca_system_score_gemma":0.00005776628,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003872236,"about_ca_topic_score_gemma":0.001052732,"domain_scores_codex":[0.9980582,0.00008522192,0.001033292,0.0002230526,0.000462989,0.0001372596],"domain_scores_gemma":[0.997974,0.0001244471,0.0008673835,0.00004034274,0.0009460414,0.00004773302],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002600418,0.0004385746,0.001241233,0.00009406833,0.00005268093,0.00001914563,0.00006295763,0.0001314294,0.9925921,0.001407208,0.001511927,0.002188636],"study_design_scores_gemma":[0.003311833,0.0003355973,0.2749825,0.006528371,0.0001694553,0.000164261,0.002849433,0.003318822,0.6881517,0.001207747,0.01846408,0.0005162937],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9819527,0.01000727,0.0005701511,0.005905906,0.000949432,0.0001964153,0.0002530289,0.00000459143,0.0001604528],"genre_scores_gemma":[0.9911262,0.006844227,0.000557606,0.0001062995,0.0007415002,0.000005341592,0.0001035273,0.000001033014,0.0005143036],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3044405,"threshold_uncertainty_score":0.3335787,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03557708225841782,"score_gpt":0.2390681999445355,"score_spread":0.2034911176861177,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}