{"id":"W7162781815","doi":"10.5066/p13ykpgg","title":"16S rRNA whole-organism microbiome sequencing for larval insects, adult insects, and riparian spiders collected above and below a per- and polyfluoroalkyl substances (PFAS) source","year":2022,"lang":"","type":"dataset","venue":"USGS DOI Tool Production Environment","topic":"","field":"","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"","keywords":"Larva; Riparian zone; 16S ribosomal RNA; Microbiome; Accession number (library science); Metagenomics; DNA sequencing","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","sts","scholarly_communication","research_integrity","insufficient_payload"],"consensus_categories":["metaepi_narrow","sts"],"category_scores_codex":[0.002808541,0.003173546,0.002681866,0.001776723,0.004663443,0.001172255,0.0008573902,0.001256741,0.004754735],"category_scores_gemma":[0.0009789718,0.003764244,0.0003551925,0.001320414,0.003011271,0.001689306,0.001565401,0.002634835,0.0002290931],"about_ca_system_candidate":true,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.005465306,"about_ca_system_score_gemma":0.0007684851,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001106746,"about_ca_topic_score_gemma":0.00064308,"domain_scores_codex":[0.9842528,0.001413088,0.002780819,0.00700861,0.001943841,0.002600876],"domain_scores_gemma":[0.9930757,0.0003679879,0.002804083,0.002571823,0.0002011653,0.0009792487],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.004203601,0.002019099,0.001036083,0.004152866,0.002932048,0.0001282744,0.01676985,0.001556265,0.6151595,0.00002408815,0.3450883,0.00692996],"study_design_scores_gemma":[0.009086065,0.002680798,0.004736591,0.0005303134,0.002967727,0.002514733,0.009459518,0.0003370205,0.01608169,0.0001001286,0.9466164,0.004889003],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"dataset","genre_scores_codex":[0.5558393,0.02034899,0.0001127676,0.001356033,0.001551333,0.008686255,0.4118831,0.0002156823,0.000006494767],"genre_scores_gemma":[0.1146236,0.05633735,0.007968758,0.001647832,0.003695717,0.004595343,0.8020966,0.002428854,0.006605916],"genre_candidate":"dataset","genre_consensus":null,"teacher_disagreement_score":0.6015281,"threshold_uncertainty_score":0.9998646,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01068779801188777,"score_gpt":0.2002279031276791,"score_spread":0.1895401051157914,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}