{"id":"W7162995956","doi":"10.6082/1x8qm-kgk93","title":"Mycobacterium tuberculosis carrying the rifampicin drug-resistance-conferring rpoB mutation H445Y is associated with suppressed immunity through type I interferons","year":2023,"lang":"en","type":"article","venue":"University of Chicago","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"","keywords":"Immune system; Mycobacterium tuberculosis; Tuberculosis; Immunity; Pathogenesis; Cytokine; Rifampicin; Mutation","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004510387,0.0001491562,0.0003911848,0.0001306792,0.0003144367,0.0000116441,0.0002432642,0.000117676,0.0001968138],"category_scores_gemma":[0.000474618,0.0001169595,0.0001173726,0.0006158794,0.0003124902,0.0001428232,0.0001383241,0.0004579569,0.00005032553],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001324145,"about_ca_system_score_gemma":0.0001327471,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00192291,"about_ca_topic_score_gemma":0.001970447,"domain_scores_codex":[0.998592,0.0003258493,0.0001763867,0.0002507302,0.0002739979,0.00038104],"domain_scores_gemma":[0.9985439,0.0005585403,0.000117829,0.0003993459,0.0002797927,0.0001006571],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.01208899,0.001081508,0.4207903,0.001305367,0.008102975,0.001031706,0.1331131,0.0004123323,0.1359677,0.002077877,0.2824389,0.001589181],"study_design_scores_gemma":[0.004275417,0.0005085637,0.946962,0.0008586366,0.0006580697,0.00002391828,0.01690474,0.001395634,0.007590949,0.0004447939,0.01996877,0.0004085408],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9787654,0.00007115239,0.00006741591,0.0145436,0.00007113951,0.0002805873,0.00004279304,0.0001112146,0.006046707],"genre_scores_gemma":[0.9963806,0.0002515654,0.0001385702,0.0003757938,0.00002888348,8.061563e-7,0.0001867261,0.0000165579,0.002620496],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5261716,"threshold_uncertainty_score":0.476947,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02892666934341001,"score_gpt":0.2723241335091482,"score_spread":0.2433974641657382,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}