{"id":"W79370845","doi":"10.1096/fasebj.20.5.a945-a","title":"A NETWORK OF PROTEIN COMPLEXES SIGNALING TO THE RNA POLYMERASE II TRANSCRIPTION APPARATUS IN HUMAN CELLS","year":2006,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Cancer-related gene regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval; Muscular Dystrophy Canada; University of Toronto; Université de Sherbrooke; Montreal Clinical Research Institute","funders":"","keywords":"RNA polymerase II; RNA splicing; Cell biology; Biology; Chromatin; Gene silencing; Transcription (linguistics); Messenger RNA; Gene expression; RNA polymerase; SR protein; Alternative splicing; RNA-binding protein; Computational biology; RNA; Gene; Promoter; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003835435,0.00009337472,0.00009829713,0.00002842544,0.0002605195,0.00002346028,0.0001721326,0.00006209227,0.00002045229],"category_scores_gemma":[0.000003618896,0.00006197936,0.00007592718,0.0001487327,0.00004770747,0.00000349476,0.00002609454,0.0001522827,0.000001304226],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000264778,"about_ca_system_score_gemma":0.00004545648,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000154566,"about_ca_topic_score_gemma":0.0002744024,"domain_scores_codex":[0.9991518,0.0001316927,0.0002780232,0.0001081149,0.0001368958,0.0001934699],"domain_scores_gemma":[0.9996169,0.00000525812,0.0001359454,0.0001655028,0.00004443594,0.00003200636],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001020717,0.0000263952,0.00003888015,0.000002795535,0.00001357217,8.193061e-7,0.00009989912,0.1080293,0.8900864,0.00006704425,0.0009629984,0.0005697415],"study_design_scores_gemma":[0.0004154037,0.0001829912,0.0005342335,0.00004766184,0.00001708,0.00001875739,0.00004538898,0.0001940064,0.9967399,0.0004124511,0.001312241,0.00007985592],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.994469,0.001726834,0.002691964,0.0005798851,0.0001040364,0.0002855799,0.000006693047,0.000003002562,0.0001330155],"genre_scores_gemma":[0.9985306,0.00001085779,0.0001435965,0.00007953628,0.000862146,0.0000101579,0.00001723703,0.00001172175,0.0003341523],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1078353,"threshold_uncertainty_score":0.2527445,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01007259857546997,"score_gpt":0.2286245546996646,"score_spread":0.2185519561241946,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}