{"id":"W83006640","doi":"10.2144/00291bc01","title":"Color and Graphic Display (CGD): Programs for Multiple Sequence Alignment Analysis in Spreadsheet Software","year":2000,"lang":"en","type":"article","venue":"BioTechniques","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Université de Rennes 1; McGill University","keywords":"Computer science; Software; Alignment-free sequence analysis; Sequence (biology); Sequence alignment; Set (abstract data type); Multiple sequence alignment; Sequence analysis; DNA sequencing; Computational biology; Consensus sequence; Computer graphics (images); Programming language; Biology; Base sequence; Genetics; Peptide sequence; DNA; Gene","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004394668,0.002779755,0.001560843,0.005718246,0.00076636,0.001814132,0.00319076,0.001099057,0.06983048],"category_scores_gemma":[0.01111305,0.001710963,0.001245435,0.004037684,0.0007213586,0.002325561,0.002183096,0.003314504,0.03701083],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000673729,"about_ca_system_score_gemma":0.001378206,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001247162,"about_ca_topic_score_gemma":0.001565257,"domain_scores_codex":[0.9977597,0.0006070657,0.0004438021,0.0003460245,0.0007056802,0.0001377871],"domain_scores_gemma":[0.9936106,0.004245448,0.0005702517,0.0005105762,0.0008099645,0.0002532139],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001366375,0.0003937215,0.001891315,0.003319756,0.000370855,0.000616738,0.0006875209,0.00411613,0.05362421,0.01298342,0.4488334,0.4717966],"study_design_scores_gemma":[0.0009805443,0.0004342357,0.007362907,0.00069351,0.0002833362,0.002261862,0.0001801037,0.07896779,0.1134689,0.0354344,0.7592945,0.00063784],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"methods","genre_gemma":"software","genre_scores_codex":[0.002277203,0.0005490644,0.7203685,0.0002418566,0.0002408521,0.0007897372,0.0129231,0.2571693,0.005440333],"genre_scores_gemma":[0.005948063,0.0006421123,0.9427606,0.0002815548,0.00008661427,0.002150488,0.01125591,0.03091775,0.005956921],"genre_candidate":"software","genre_consensus":null,"teacher_disagreement_score":0.06983048,"threshold_uncertainty_score":0.2336062,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01625977261285757,"score_gpt":0.2620937474279108,"score_spread":0.2458339748150532,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}