{"id":"W976619511","doi":"10.1007/978-1-4471-5298-9_11","title":"Fractionation, Rearrangement, Consolidation, Reconstruction","year":2013,"lang":"en","type":"book-chapter","venue":"Computational biology","topic":"Genome Rearrangement Algorithms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Genome; Synteny; Biology; Adjacency list; Extant taxon; Computational biology; Evolutionary biology; Gene; Genetics; Computer science; Algorithm","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0001259784,0.0002948808,0.0002346213,0.0001799848,0.0001236994,0.00003110298,0.0001751111,0.0005116204,0.002999285],"category_scores_gemma":[0.00004688492,0.0003210765,0.0001255816,0.00002827041,0.0001988717,0.000007191756,0.00009501634,0.000173567,0.001274037],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005939408,"about_ca_system_score_gemma":0.0001512125,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000005379733,"about_ca_topic_score_gemma":0.000004445034,"domain_scores_codex":[0.9986331,0.00003960903,0.0004090632,0.0005766105,0.0001488203,0.0001928346],"domain_scores_gemma":[0.9986778,0.00003710387,0.0003468382,0.0002639081,0.0005987108,0.00007567229],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001313769,0.0001333217,0.00152878,0.0001327733,0.002393463,0.000006046557,0.0000644483,0.003563522,0.04426798,0.4248772,0.2649099,0.2579911],"study_design_scores_gemma":[0.0005175573,0.0001810954,0.000611256,0.00002302992,0.00004784198,0.00007569751,0.000007267633,0.0002608432,0.0002352165,0.1041474,0.8934391,0.0004537539],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"other","genre_gemma":"other","genre_scores_codex":[0.003466562,0.002484734,0.05010075,0.001225834,0.00242059,0.00142493,0.000430769,0.0001197702,0.9383261],"genre_scores_gemma":[0.04096621,0.001591853,0.03102336,0.001451301,0.003782236,0.0002219093,0.03756649,0.0002260681,0.8831705],"genre_candidate":"other","genre_consensus":"other","teacher_disagreement_score":0.6285291,"threshold_uncertainty_score":0.9999241,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01614198321091935,"score_gpt":0.249007113949463,"score_spread":0.2328651307385436,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}